Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0741 ATGACAAGAGAAATGACACGTACATCTCAAAAGAGATCTGAAAGAGAGAGAAAGCGGCATTGTTTTGCATTTTTGTTTCTCCATTTTTACATTATTTATTCCCCATTCTACACATACTCTTCCTCTCAAACCATACTATTTCCTCTCATATTTTTCTCCAAAACTCCAACTTTGGCTACGCTTGCAAAACCAACAAAAGTTTTCAATCATTTCCAGATTTTGAAACTTGCCTCAAAGAAAAACATCATCGTGCATTTCAGAGATCACACTACCTTGTACCGAAACAGTGGTACAAGGAAAGAGAAAGAGAAATTCTCGTTCTGTGCTAAAATTTTGTATTCCAAGAAGATGTCGTTACTCTCCGATCTGATCAACCTTAACCTCTCCAACACTTCTGAGAAGGTGATCGCGGAATACATATGGATTGGTGGATCTGGTATGGACATGAGGAGTAAGGCACGGACTCTTTCAGGTCCGGTTAATGATCCTTCCGAGCTTCCCAAATGGACCTATGATGGTTCCAGCACTGGTCAAGCTCCTGGAGCAGATAGTGAAGTGCTTTTATATCCACAAGCAATTTTCAAGGATCCATTCAGGAGGGGTGAAAATATTCTGGTTATGTGTGATACTTACACTGCTGCGGGAGAACCCATTCCTACCAACACGAGATATAATGCGGCAAAGATATTTAGCCATCCTGATGTTGTTGCTGAAGAACCCTGGTATGGCATTGAGCAAGAATACACCTTGCTGCAGAAAGATGTCCAATGGCCCCTCGGATGGCCTATTGGTGGTTTTCCTGGACCCCAGGGACCCTACTATTGTGGTGTTGGAGCAAACAAAGCTTTCGGACGGGACATTGTGAACTCTCATTTCAAAGCATGTCTTTATGCAGGCATTAATATTACTGGAATTAATGGAGAAGTGATGCCCGGTCAGTGGGAATTCCAAATTGGTCCATCGGCTGGCATATCTGCGTGTGACGACTTGTGGGTTGCTCGCTACATTTTGGAGAGGATCACCGAGATTGCTGGGGTGGTGCTTTCTTTTGATCCTCAACCGATTAAGGGTGATTGGAATTGTGCTGGCGCTCACACGAATTTCAGTACCAAGTCCATGAGAAACGATGGTGGCTATGAAGTCATCAAAAAAGCAATCAGTAAGTTGGAAAAGAGGCACAAGGAACACATAGCCGCTTATGGAGAAGGCAATGAACGTCGTTTAACAGGAAAACACGAGACAGCCAACATAAACACCTTCATATGGGGTGTTGCAAACCGTGGTGCTTCAATTAGGGTAGGGAGGGACACAGAGAGGAAAGGGAAGGGATACTTTGAGGATAGAAGGCCTGCATCTAACATGGACCCTTATGTCGTCACTTCCATGATTGCTCAGACAACCATTCTTTGGAAACCATGA 1419 0.4376 MTREMTRTSQKRSERERKRHCFAFLFLHFYIIYSPFYTYSSSQTILFPLIFFSKTPTLATLAKPTKVFNHFQILKLASKKNIIVHFRDHTTLYRNSGTRKEKEKFSFCAKILYSKKMSLLSDLINLNLSNTSEKVIAEYIWIGGSGMDMRSKARTLSGPVNDPSELPKWTYDGSSTGQAPGADSEVLLYPQAIFKDPFRRGENILVMCDTYTAAGEPIPTNTRYNAAKIFSHPDVVAEEPWYGIEQEYTLLQKDVQWPLGWPIGGFPGPQGPYYCGVGANKAFGRDIVNSHFKACLYAGINITGINGEVMPGQWEFQIGPSAGISACDDLWVARYILERITEIAGVVLSFDPQPIKGDWNCAGAHTNFSTKSMRNDGGYEVIKKAISKLEKRHKEHIAAYGEGNERRLTGKHETANINTFIWGVANRGASIRVGRDTERKGKGYFEDRRPASNMDPYVVTSMIAQTTILWKP* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0741 472 ProSitePatterns Glutamine synthetase signature 1. 171 188 IPR027302 -
Vra6g0741 472 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 222 472 IPR008146 GO:0004356|GO:0006807
Vra6g0741 472 Pfam Glutamine synthetase, catalytic domain 284 462 IPR008146 GO:0004356|GO:0006807
Vra6g0741 472 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 135 215 IPR008147 GO:0004356|GO:0006542|GO:0006807
Vra6g0741 472 PANTHER GLUTAMINE SYNTHETASE 117 472 - -
Vra6g0741 472 PANTHER GLUTAMINE SYNTHETASE 117 472 - -
Vra6g0741 472 Pfam Glutamine synthetase, beta-Grasp domain 137 212 IPR008147 GO:0004356|GO:0006542|GO:0006807
Vra6g0741 472 SUPERFAMILY Glutamine synthetase/guanido kinase 219 468 IPR014746 GO:0003824
Vra6g0741 472 Gene3D - 117 219 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vra6g0741 472 SUPERFAMILY Glutamine synthetase, N-terminal domain 132 218 IPR036651 GO:0004356|GO:0006542|GO:0006807
Vra6g0741 472 SMART Gln_synt_C_2 219 467 IPR008146 GO:0004356|GO:0006807
Vra6g0741 472 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 220 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0741 Vra-Chr6 7126389 7132425 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0741 K01915 - gmx:547798 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g0931 3 9316879 9320674 Vra6g0741 6 7126389 7132425 PCT