Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0660 ATGGAGAGCGCGGTGGATCGTTCTCGGGGTTTCATGAAGGACGTGAAGCGTGTGATCATCAAAGTTGGCACCGCGGTGGTCACTCGCGAAGAAGGAAGGTTAGCGGTTGGAAGATTGGGAGCTCTGTGCGAGCAGATTAAGCAACTCAACTCTCTCGGATACGACATTATACTCGTCTCCTCTGGCGCCGTCGGTATTGGACGGCAAAGGCTACATTTCCGTAAATTAATCAACAGCAGCTTCGCCGACCTTCAGAAACCCCAACTCGAACTCGACGGCAAGGCCTGCGCTGCCGTTGGACAGAACAGTCTCATGGCTCTCTACGATACGCTGTTCACTCAGCTCGATGTGACATCGGCTCAGCTTCTTGTGACGGATAACGATTTTCGAGATAAGGATTTCAGGAAGCAGCTTACTGAGACTGTGAAGTCGCTGTTGGCGCTGAAGGTTATTCCGGTGTTCAATGAGAACGATGCCGTTAGTACCAGGAAGGCTCCCTATGAGGATTCTTCTGGTATATTTTGGGATAATGATAGTTTATCTGCTTTATTAGCCTTGGAGTTAAAAGCCGATCTCCTTGTTTTGTTGAGTGATGTAGAAGGTCTTTACAGTGGCCCTCCAAGTGACCCACATTCAAAGCTTATTTATACATATAACAAGGAAAAACATCAAAGTGAAATTACTTTTGGTGACAAGTCTAGAGTGGGAAGAGGCGGAATGACTGCCAAAGTAAAAGCTGCGGTTCATGCAGCTGAAGCTGGCATTCCTGTTGTTATTACCAGTGGTTTTGCACCTGAGAATATCATTAATGTTCTCCAAGGACAACGTATAGGAACTCTCTTCCATAAAGATGCACATGAGTGGGCTCAAGTAAAAGAGGTTGATGCACGTGAGATGGCTGTTGCGGCCAGGGAATGTTCCAGAAGGCTCCAGGCCTTATCTTCAGAGGAAAGGAAACAAATTTTACTTAAAATAGCTGATGCCCTGGAAGCAAATGAAAAAATAATCAGGATTGAAAATGAAGCTGATGTTACTGCTGCACAAGAAGCAGGATATGAAAAATCCTTGGTGGCTAGGCTAGCTTTAAAACCTGGGAAGATTGCAAGTCTTGCAAACAACATGCGAATTATTGCCAATATGGAAGATCCAATTGGTCGAGTATTAAAACGTACTGAGCTTTCAGATGGGCTAATTTTGGAAAAGACATCATCTCCTTTGGGAGTGCTCCTTATTGTTTTTGAGTCACGTCCTGATGCTCTTGTACAGATAGCTTCATTGGCAATCCGAAGTGGGAATGGGCTTCTCTTGAAAGGTGGCAAAGAAGCTAAGCGATCAAATGCAATTTTGCACAAAGTAATTATTGAGGCCATACCAGATAATGTTGGTGGAAAACTTATAGGACTTGTGACCTCAAGGGAAGAAATCCCTGAGCTACTTAAGCTGGATGACGTAATTGATCTGGTAATTCCAAGAGGCAGTAACAAACTTGTTTCTCAGATCAAGAGTTCAACTAAAATTCCTGTTTTAGGTCATGCTGATGGAATTTGCCATGTCTATGTTGATAAGTCTGCTAATGTGGAGATGGCAAAGCGGATTGTATTAGATGCAAAAATTGATTATCCGGCAGCCTGCAATGCCATGGAAACACTTCTTATCCACAAGGATTTGATAGAGAAAGGTTGGCTCAATGAGATCATTCTTGACCTTCGAACTGAAGGCGTTATATTATATGGAGGACCTGTGGCAAGTTCTCTGTTAAATATTCCACAAGCACATTCATTTCATCATGAGTACAGTTCGCTGGCTTGCACCGTCGAAATTGTGGATGACGTGTATGCAGCTATTGATCATATAAATCTGCATGGAAGTGCACATACTGATTCGATTGTTGCTGAAGATAACGAAGTAGCTAATGTGTTTCTACGCCAAGTAGACAGTGCTGCTGTTTTTCACAATGCAAGCACCAGATTCAGTGATGGGGCACGATTTGGACTAGGCGCAGAGGTTGGAATTAGTACAAGCAGGATTCATGCTCGAGGTCCAGTAGGAGTTGAGGGATTGTTAACAACAAGATGGATACTAAAAGGAAGGGGACAAGTGGTAGATGGTGATAGAGGCGTTGTCTACACCCACAAAGACCTTGCAATTTAA 2151 0.4379 MESAVDRSRGFMKDVKRVIIKVGTAVVTREEGRLAVGRLGALCEQIKQLNSLGYDIILVSSGAVGIGRQRLHFRKLINSSFADLQKPQLELDGKACAAVGQNSLMALYDTLFTQLDVTSAQLLVTDNDFRDKDFRKQLTETVKSLLALKVIPVFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLVLLSDVEGLYSGPPSDPHSKLIYTYNKEKHQSEITFGDKSRVGRGGMTAKVKAAVHAAEAGIPVVITSGFAPENIINVLQGQRIGTLFHKDAHEWAQVKEVDAREMAVAARECSRRLQALSSEERKQILLKIADALEANEKIIRIENEADVTAAQEAGYEKSLVARLALKPGKIASLANNMRIIANMEDPIGRVLKRTELSDGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVIIEAIPDNVGGKLIGLVTSREEIPELLKLDDVIDLVIPRGSNKLVSQIKSSTKIPVLGHADGICHVYVDKSANVEMAKRIVLDAKIDYPAACNAMETLLIHKDLIEKGWLNEIILDLRTEGVILYGGPVASSLLNIPQAHSFHHEYSSLACTVEIVDDVYAAIDHINLHGSAHTDSIVAEDNEVANVFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGRGQVVDGDRGVVYTHKDLAI* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0660 716 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 4 715 - -
Vra6g0660 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 304 699 IPR016162 GO:0016491
Vra6g0660 716 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 9 716 IPR005766 GO:0003824|GO:0006561
Vra6g0660 716 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 513 659 IPR016163 GO:0016620
Vra6g0660 716 PRINTS Glutamate 5-kinase family signature 53 67 IPR001057 GO:0005524|GO:0016301
Vra6g0660 716 PRINTS Glutamate 5-kinase family signature 97 125 IPR001057 GO:0005524|GO:0016301
Vra6g0660 716 PRINTS Glutamate 5-kinase family signature 137 158 IPR001057 GO:0005524|GO:0016301
Vra6g0660 716 PRINTS Glutamate 5-kinase family signature 176 203 IPR001057 GO:0005524|GO:0016301
Vra6g0660 716 PRINTS Glutamate 5-kinase family signature 235 255 IPR001057 GO:0005524|GO:0016301
Vra6g0660 716 Hamap Gamma-glutamyl phosphate reductase [proA]. 295 701 IPR000965 GO:0004350|GO:0006561
Vra6g0660 716 Gene3D - 5 290 IPR036393 -
Vra6g0660 716 ProSitePatterns Gamma-glutamyl phosphate reductase signature. 608 629 IPR020593 GO:0004350|GO:0006561
Vra6g0660 716 SUPERFAMILY Carbamate kinase-like 16 281 IPR036393 -
Vra6g0660 716 Pfam Aldehyde dehydrogenase family 287 559 IPR015590 GO:0016491
Vra6g0660 716 CDD ALDH_F18-19_ProA-GPR 297 696 IPR000965 GO:0004350|GO:0006561
Vra6g0660 716 PIRSF P5C_synthetase 1 716 IPR005766 GO:0003824|GO:0006561
Vra6g0660 716 Pfam Amino acid kinase family 16 261 IPR001048 -
Vra6g0660 716 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 303 690 IPR000965 GO:0004350|GO:0006561
Vra6g0660 716 ProSitePatterns Glutamate 5-kinase signature. 233 250 IPR019797 GO:0004349|GO:0006561
Vra6g0660 716 SUPERFAMILY ALDH-like 295 700 IPR016161 GO:0016491
Vra6g0660 716 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 4 715 - -
Vra6g0660 716 TIGRFAM proB: glutamate 5-kinase 16 290 IPR005715 GO:0005737|GO:0006561
Vra6g0660 716 Hamap Glutamate 5-kinase [proB]. 16 285 IPR005715 GO:0005737|GO:0006561
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0660 Vra-Chr6 6124860 6132966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0660 K12657 - gmx:100816150 1266.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0660 6 6124860 6132966 Vra6g0660 6 6124860 6132966 ECH
Vra3g0995 3 10005967 10012044 Vra6g0660 6 6124860 6132966 PCT