Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0632 ATGGATGAAGCTGACTTTGACGCCGCGTTTCCCTTCCCCTCCGAGTTTCCTTACGAGTTTCACTCGCCTGGGGTAGAACCGGTTGAGTCCGGTTCCACTGGGACCGAGAGCAGCGACGAGGAGGACTTCTTTGCTGGCTTGACTCGCCGCCTCGGTCATGCATCGATTCATGACACCAGGAAGGAACAGATGCTCACTGTTCCAATCTGCAACGCTGAAAAAACTGAGAGTCAGAAACTGATGGCTCGGGGTTTGGCTGGCTCGCCTCAGTCTATACTCAGTGGAATCGGAAGCTGGTCCGGTCGGAGTGGCGGTTCCGGCGACGGGAGTCCCAACGGGTCTTCTCGTGTTCCTTCGCCAACGACGACGCCGTTTAAGCCTACAAATGATGCGTGGGATGTACTGTACGCGGCCGCAGGGCAAGTTGCGAGGTTGAGGATGAACGACGAAGTCTCTTCGAAGTTTGAGTTTCAGAACGGGGGTGTTTTTGGGGGTGTTTCTCCGCCAGTAGTCGCGGAGAATGCGTTTTTCGTGAACCATGGCGGTCCTCCGGCTCGGTACCCGCAGGTGAGACCGGAGCAGATGCTGAAGCAGCAGTGTGGTTCGGTTTGGGGAAGGCAAGAGAAGGTTGCTTGGGTGACCCAGCAGCACCAGCCACAAGTTCAGAACAGAGTACGTGACTTGCGTGATTTTGGGTATGACTATGAAGCCATGAACTGCATACGCACCTTGCCCCATTCTGCATGGCGCCGTCCTCTTCAAGCGAAGCCCCAGAATCAGCAGGTTTCGCATTTCGGATCAGGGTCACGACCCGGTTTGCAAGCTGGATCTGGCGTTGTTAACAAAAAGGGTTGCGCTGGAACAGGGGTTTTCCTGCCACGTCAGTACGGGGCACCTCCACCGGAATCTCGCAAGAAAACAAGTTGTGCTGCTCCAGTTCTGGTCCCAGCTAAGGTTATCCATGCTTTGAACCTCAACATTGATGACATCAATGCCGCTAGCCAACAACGCATCTCTAGTGCATTCGGGCCGGACTATGATGCTTTGTTAGCAAGGAGAAATGCTCTTATCCTTCAACAGAAGTTCAGCATGCGGCGAGAGGAAGCTGCCAACCATGAACTTCGCTTGCCTCAAGAATGGACGTACTGA 1149 0.544 MDEADFDAAFPFPSEFPYEFHSPGVEPVESGSTGTESSDEEDFFAGLTRRLGHASIHDTRKEQMLTVPICNAEKTESQKLMARGLAGSPQSILSGIGSWSGRSGGSGDGSPNGSSRVPSPTTTPFKPTNDAWDVLYAAAGQVARLRMNDEVSSKFEFQNGGVFGGVSPPVVAENAFFVNHGGPPARYPQVRPEQMLKQQCGSVWGRQEKVAWVTQQHQPQVQNRVRDLRDFGYDYEAMNCIRTLPHSAWRRPLQAKPQNQQVSHFGSGSRPGLQAGSGVVNKKGCAGTGVFLPRQYGAPPPESRKKTSCAAPVLVPAKVIHALNLNIDDINAASQQRISSAFGPDYDALLARRNALILQQKFSMRREEAANHELRLPQEWTY* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0632 382 MobiDBLite consensus disorder prediction 93 126 - -
Vra6g0632 382 MobiDBLite consensus disorder prediction 18 40 - -
Vra6g0632 382 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX NON-CORE SUBUNIT NAF1-LIKE 1 382 - -
Vra6g0632 382 PANTHER TIP41-LIKE PROTEIN 1 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0632 Vra-Chr6 5784630 5786741 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0632 - - gmx:100816574 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0632 6 5784630 5786741 Vra6g0632 6 5784630 5786741 ECH
Vra3g1007 3 10138191 10140311 Vra6g0632 6 5784630 5786741 PCT