Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0599 ATGAATCGGAGCTTCATAGCGCCGGAATCCAAAATGCAAGACGCCTTCAAGCAGAGGCAAAAGCAATTGGGGGCTCTCAGGTCCTCTGTGCGCGCCAAGGAAAGGGACGACGAACTCGCGTTGTTCCTGGAAATGAGGAGCCGCGAGAAGGAGCGTGGCGATCTCATGCTTCGCGCCGCCGAGGATTTTGACGGTGCAGCCTTGTTGGGCTCAAATCCAGACAATTCTCCCTTGTTTAACGTTCCGTCTTCCATGGCGGCGCTGGTACGAAAGACTGGTGCTGATGATTTTCTCAATTCGGAGAATGATAAGAATGATTATGACTGGCTTCTAACCCCACCTGGGACTCCCCTTTTTCCTTCTTTGGAGATGGAATCAACAAAAACTGTTATGAATCAGCTTGGGGCTCTAACTTTACGCCCCACATCATTAAAAACTAGATTGGCAAATCCTCCGTCAGAACATACTGGAAGGAGCAACTTAGTATCTAAACAACCAGCCTCCTCCCCTGGGTTGACCTCTTCAGGTGGTGGACTTAGAAGGCCCTCATCATCAGGGAACTTGTCAGAACTAGCTGGAAGAAGCAACTTAGTATCTAAACAACCAGTCTCTTCCCCCGGGTTGAGTTCTTCAGTTGGGGGAACTAGGAGGTCCTCATCATCAGGGAATCTGGGATCTAGATCTGTAACTCCTACTGGACGACCTACATTGACCACAGTTTCAAAATCATCTAGACCTTCGACACCCACTTCTCGGACAACCATACCATCAACTAGGGCAATGGTAGCAACTACCAAGACCTCAGTTTCTTCAGCCAAGCCCGTGGTTTCTGCTACTAAGGCTGCAGTTTCTCTTGGTAAAACTTCTACAGTACCTGCTGCTAAAACCACAATCCCATCTAGATCCTCTACACCTTTGTCAAGATCTACTGCAAGATCTTCAACACCAACAACCAGAACTACCTTACCTGCATCGAGGCCTACTTCAAGGGCATCAACCCCAACTAGGCGGCCAACAACACCATCTAATGTACCCACCGTATCTTCTCCGTCTGTAAAGACTTCTTCAATCTCCAAGTCAGCTCCTGTGATGTCAAGGCAGCCAATAACATCACCTGGCACTTCACCAACTGTGAAGTCAAGCCCAAGATCATGGAAGCCATCTGAGATGCCTGGCTTTTCACTTGATGCGCCACCCAATTTGAGGACAACGCTTCCAGAAAGGCCACTGTCAACAACTAGGGGTAGGCCTGGAGCACCCAGTTCACGATCCTCTTCTGTTGAGCCTCCTTCTATTGGTAGACCAAGGCGGCAATCGTGCTCTCCGTCTAGAGGACGTTCCTCCAATGGCATTTCTCATCCAACTGGAAGCTCTATGCCGGCAGTTAATCGTGGGTACTCCAGAGCAAATGACAATGTCAGTCCTGTTGTAATGGGCACCAAAATGGTTGAGAGGGTAGTGAATATGCGGAAATTGGCACCACCAAGGCTGGATGGCACGAACTCTTCCCATAATCTTTCTGGTAAATCATCTTCATCTCCGGATACCTCTGGTTTTGGAAGGTCACTCTCGAAGAAATCCTTGGATATGGCAATAAGGCATATGGATATAAGGCGAAGGGTTCCAGGCAATTTACGGTCATCAATGATGACGAACATTCCAGCATCTTCAATGTATAGTGTGAGATCTGGTTCTCAGCGTAGCCGCACTGTTAGTATCTCGGGCTCTCCTCATGCCACTAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCCAAATGGTCTTTGCTTAGATAATAGTGAAATAGACGATGATATTGGCAGTGAAAGAAGTGGTCAATCTCCTGCCAGTGTGCGGGGTAGGTAA 1866 0.4823 MNRSFIAPESKMQDAFKQRQKQLGALRSSVRAKERDDELALFLEMRSREKERGDLMLRAAEDFDGAALLGSNPDNSPLFNVPSSMAALVRKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEMESTKTVMNQLGALTLRPTSLKTRLANPPSEHTGRSNLVSKQPASSPGLTSSGGGLRRPSSSGNLSELAGRSNLVSKQPVSSPGLSSSVGGTRRSSSSGNLGSRSVTPTGRPTLTTVSKSSRPSTPTSRTTIPSTRAMVATTKTSVSSAKPVVSATKAAVSLGKTSTVPAAKTTIPSRSSTPLSRSTARSSTPTTRTTLPASRPTSRASTPTRRPTTPSNVPTVSSPSVKTSSISKSAPVMSRQPITSPGTSPTVKSSPRSWKPSEMPGFSLDAPPNLRTTLPERPLSTTRGRPGAPSSRSSSVEPPSIGRPRRQSCSPSRGRSSNGISHPTGSSMPAVNRGYSRANDNVSPVVMGTKMVERVVNMRKLAPPRLDGTNSSHNLSGKSSSSPDTSGFGRSLSKKSLDMAIRHMDIRRRVPGNLRSSMMTNIPASSMYSVRSGSQRSRTVSISGSPHATSSNASSEVSVNPNGLCLDNSEIDDDIGSERSGQSPASVRGR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0599 621 MobiDBLite consensus disorder prediction 293 384 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 494 522 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 556 596 - -
Vra6g0599 621 Coils Coil 621 621 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 141 277 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 405 473 - -
Vra6g0599 621 PANTHER PROTEIN, PUTATIVE-RELATED 1 188 - -
Vra6g0599 621 PANTHER PROTEIN, PUTATIVE-RELATED 221 621 - -
Vra6g0599 621 PANTHER PROTEIN, PUTATIVE-RELATED 191 222 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 293 473 - -
Vra6g0599 621 PANTHER GASTRIC MUCIN-LIKE PROTEIN 221 621 - -
Vra6g0599 621 PANTHER GASTRIC MUCIN-LIKE PROTEIN 191 222 - -
Vra6g0599 621 PANTHER GASTRIC MUCIN-LIKE PROTEIN 1 188 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 556 621 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 498 522 - -
Vra6g0599 621 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0599 Vra-Chr6 5402935 5408478 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0599 - - vra:106765292 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0599 6 5402935 5408478 Vra6g0599 6 5402935 5408478 ECH
Vra3g1038 3 10364635 10369949 Vra6g0599 6 5402935 5408478 PCT