Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0548 ATGGCTTACTACAGATTTCTTGATGTGTTTTCATGGATTCAAAACAGTCCACCAATCACAGAATGGGAAACAGGTTCCATGTCTATGAGCATATGTTACACAAACTCATCTCAACCATCACTAAATCTTATCATAGCAAAAAATCACCACCAATCCTCAAGTCTCTCTTTAGCCATTGTGGCAGATTTCAGCATTCCTATATCTCTTTGGACCTCTAAACCTTTCAAACCTAACACCAAAACCATGAGGTTAACAGATGGTGAAACCATTTCCAATCTCCTTGCTAATTTCATACAAGATATCCTTCACTATGGCTCCAACAAGAAGAATGTTTCCTACATCAAGTTTCCCAAACTTGATTCCATTTCTAACTTCCAAGACATTTTCAACCTTGCTTTCCTCACTCTCTTGTTCCTAGTTTGCATATACGAAGCCCCTTCTGATCTTCGTTGTAGTTGTCTCAGCACTTTGAAAGAACAACTTGCAGGGTGTCGGTCAAGGCAAGCATCGAAGTTACTGATGAAACTCTTGGGTTCCAACTTGGAAGAACAGTGGATGCGTTCCGTGAACCTTGCAATCACAAATTGGATTGTCGAGCTCCAAGAAGCGCATCACAATGGTCAAATCACCCTCAGAACTCCATCACCTCTATTTTCTTATGCATTCTCAGCAGCTGGGTTATGGAAAGTTCAATTATACTGCCCAGTCATAAACATGGATGTTGTGACTGCAAACAACCATCCACCTGATGAGAGGCTTCAATTCTCTCTCAAATATCAACAGCTTGAAGGTGTTCTTCAGTTCAATTACAAAGTCATAATCAAAGACAAATGGGTCGAAATCGTGGTGAACATTGACAACATAAGATGCGATGTTTTGAAATTGGTAGATGACAGTCTGATGAGAGAACGAGGAGCAGGTGCAGCTGAAAAACATTTTCCTTCAAGAATCTCGTTGCAACTTACTCCCACACTTCAACACCAGGTGTTGAGCGTATCAGTTGGGAAATCCTCGGAGAATCCGGTGATAGAGTTTGGAGTGGAGAAAGGAATAGAAGCGTCGTTCGATCCACCGAACCCTTACATGGGAATCAGCGTGTCAGCGGGAGAGTCGACAACTGTGAGCTTAAAGCCATGGAAATTCGAAGAATCTGTTTATGGGTACAGTGCAAATTTGAATTGGTTTCTTCATGATAGCGGCGATGGGAAGGAAGTGTTCTCGTCAAAGCCTTCAAAGGTTGCGATGTTTAACCCAAAGGCATGGTTCAAAGACAGGTACTCCAGTGCTTATCGCCCTTTCACGAGGCAAGGAGGAGTTATTTTTGCACGTGATGAATATGGAGAAAGTGTGTGTTGGAAAGTGGATAAAGGTGTTGTGGGGAAGATGATGGAATGGGAGGTAAGAGGTTGGATATGGTTAACATATTGGCCTAACAAGCACAAGACATTCTACCATGAAACCAAAAGATTCGACTTTCGAGAAACAGTATACCTCAGTATTTGA 1503 0.4198 MAYYRFLDVFSWIQNSPPITEWETGSMSMSICYTNSSQPSLNLIIAKNHHQSSSLSLAIVADFSIPISLWTSKPFKPNTKTMRLTDGETISNLLANFIQDILHYGSNKKNVSYIKFPKLDSISNFQDIFNLAFLTLLFLVCIYEAPSDLRCSCLSTLKEQLAGCRSRQASKLLMKLLGSNLEEQWMRSVNLAITNWIVELQEAHHNGQITLRTPSPLFSYAFSAAGLWKVQLYCPVINMDVVTANNHPPDERLQFSLKYQQLEGVLQFNYKVIIKDKWVEIVVNIDNIRCDVLKLVDDSLMRERGAGAAEKHFPSRISLQLTPTLQHQVLSVSVGKSSENPVIEFGVEKGIEASFDPPNPYMGISVSAGESTTVSLKPWKFEESVYGYSANLNWFLHDSGDGKEVFSSKPSKVAMFNPKAWFKDRYSSAYRPFTRQGGVIFARDEYGESVCWKVDKGVVGKMMEWEVRGWIWLTYWPNKHKTFYHETKRFDFRETVYLSI* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0548 500 PANTHER NEURONAL PAS DOMAIN PROTEIN 1 500 - -
Vra6g0548 500 PANTHER EXPRESSED PROTEIN 1 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0548 Vra-Chr6 4764438 4766118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0548 - - gmx:100782905 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0548 6 4764438 4766118 Vra6g0548 6 4764438 4766118 ECH
Vra2g1539 2 23293971 23297867 Vra6g0548 6 4764438 4766118 PCT