Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0275 ATGGCGATATTAATTCTGCTGCTTATTGTACTGTTCGTTCATTTACACGGTGGTGCTCATCACAAAGAGTCAAGAGGATTTACTGCAACGAGGAAGGCTTGTGATTTGTCTCAGGGAAATTGGGTTCCTGATGAATCATACCCTCTTTATAATACCTCACAATGTCCCTTTATTCTCAAACAATTTGATTGCATAAGAAATGGTCGTCCTGATAAAAACTATGTCAAGTACAGATGGCAGCCCAAAAACTGCAACTTACCAAGATTCAATGGAGCAGATTTGTTGAGAAGACTGAGAGGGAAGAGTATTTTGTTTGTGGGGGACTCCTTGAGTTTGAATCAATGGCAATCACTCACTTGCATGCTTCACACGGCTGTGCCACGTGCCAAGTACACCTCAGTCAGAACTGGGGGTCTATCCACCTTCACTTTTCCGAGGTATGATGTGAAGGTGATGCTTTCTCGTAATGCATTTTTGGTGGATATCGCAAGTGAAAGGATTGGTAGAGTGCTGAAATTAGATTCGATTGGAGATGGAAAAAGGTGGAAAGGAAACGATATACTGATATTCGACTCTTGGCATTGGTGGCTCCACATCGGAAGAAAACAACCATGGGATTTCATTCGAGAAGGAAATCACACGTACAAGGACATGGATCGTTTGGTTGCATACGAGAAAGGCTTGAAAACATGGGCGAAATGGGTTGAAGACAACGTTAATCCTAAAAAAACAAGGGTGTTCTTTCAAGGAGTGTCTCCAGATCATCTAAATGGAGGAAAGGCAAGATTCTGTGAGGGGCAAATGGTGCCAGTTTCTGGATCAAAGTATTCACATCCAGCTGAGATAGTGTTACAGAAGGTGTTGGGAAGCATGTCAAAGCGTGTGAATTTGCTGAATATTACAGCATTGTCACAGATGAGAAAAGATGGTCACCCATCTGTTTATGGATTTGGTGGAAAAAGGAGCATGGATTGCAGTCACTGGTGTCTCCCTGGTGTTCCTGATACTTGGAATTTGCTTTTATATGCAACTCTCATTCAAAATTAA 1047 0.4202 MAILILLLIVLFVHLHGGAHHKESRGFTATRKACDLSQGNWVPDESYPLYNTSQCPFILKQFDCIRNGRPDKNYVKYRWQPKNCNLPRFNGADLLRRLRGKSILFVGDSLSLNQWQSLTCMLHTAVPRAKYTSVRTGGLSTFTFPRYDVKVMLSRNAFLVDIASERIGRVLKLDSIGDGKRWKGNDILIFDSWHWWLHIGRKQPWDFIREGNHTYKDMDRLVAYEKGLKTWAKWVEDNVNPKKTRVFFQGVSPDHLNGGKARFCEGQMVPVSGSKYSHPAEIVLQKVLGSMSKRVNLLNITALSQMRKDGHPSVYGFGGKRSMDCSHWCLPGVPDTWNLLLYATLIQN* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0275 348 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 2 346 - -
Vra6g0275 348 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 86 343 IPR026057 GO:0016740
Vra6g0275 348 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 2 346 IPR029962 GO:0016413
Vra6g0275 348 Pfam PMR5 N terminal Domain 33 85 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0275 Vra-Chr6 2030333 2032966 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0275 - - gmx:100799085 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0275 6 2030333 2032966 Vra6g0275 6 2030333 2032966 ECH
Vra6g0275 6 2030333 2032966 Vra6g0275 6 2030333 2032966 PCT