Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0264 ATGGCGAAGAAGGTAGCGTGGCTGCTGCTGCTCCTCCTGATATCGGCGTCCGTGCCGGGCCTCAAAGTTTGGGCCCTGAAAACGCCGTTTCACCTGCGAGACGTGCTTCCTCTGCTGCCGAGGCATGTATCGTGGCCCATCATGACCCGCCTCCACAGCGCCGTCGATATCCTCCCCGTCTTCGTCGGCGCCGCTTCCTCCCCGGATAACGCTCTCGAGTGGAAGGGCGCCTGCTTCTACGAGAACAAAGCATGGATGGTGTTTCACAACAAGAGCCAAACTGAATATGGCGGCGGAACCCTTCACATTAAGGTTAGCAATGCTCACAGTTGGACGTGCATGGATCTTTATATTTTTGCTACACCATATCGTGTAACATGGGATTACTATTTCCTGGCCCGGGAGCATACACTTGAGATCAAAGCATGGGAAGGAAAAGCTGAGTATGATTATGTGAAAAACCATGGATTATCAATTTTTCTCTTGCAAGCTGGGATGTTGGGGACCCTTCAAGCACTTTGGGAGGTGTTCCCTCTATTTTCAAATACTGGATGGGGCGAGAACTCCAATATTAATTTTTTGGAGAAACATATGGGATCTTCTTTTGAAGTGCGCCCTCAGCCTTGGGTTACAAATGTCAGTGCTGATGACATCCATTCTGGAGATTTCCTTGCTGTTTCAAAAATACGAGGTCGGTGGGGTGCTTTTGAGACTCTAGAGAAGTGGGTTAGTGGAGCCTATGCTGGTCACACTGCTGTTTGCCTAAGAGACCCCAATGGGAAGCTTTGGGTTGGAGAGTCAGGACATGAAGATGAAAAGGGAGAAGATATAATTGCTTTGATGCCATGGGAAGAATGGTGGGACTTTGAACTGACTAAAGATGATTCCAATCCCCACATTGCATTGCTTCCGTTGCACCCTGACTTGCGTGCCAGGTTTAATGAGTCTGCCGCATGGGAGTATGCACTGAGCATGATAGGAAAACCTTATGGTTACCATAACATGATCTTCAGTTGGATAGACACTTTAAATGGGAACTATCCGCCGCCCTTGGATGCTAACGTGGTTGCTTGCGTTATGACAATTTGGAATCAACTCCAACCTGCGTATGCAGCAAATATGTGGAATGAAGCCCTGAACAAAAGACTTGGAACTGAAGGACTTGACCTTCCAGATGTTTTAGTAGAAGTTGAAAAGCGTGGATCATCTTTTGATGAACTGCTGACAATTCCTGAACAGGATGATTGGGTCTATAGTGACGGGAGGTCAACATCTTGCATTGCTTTTATACTTGAGATGTACAAGGAGGCAGGGCTGTTCGATCCAATTGCTAGTTCTATTCAAGTGACAGAATTTACGATAAAAGATGCTTACATTCTCAATTTTTTTGAGAACAATTCTAGTCGCTTACCAAAATGGTGCAATGATGGAGACACTGTGAAGCTTCCTTATTGTCAAATTAAAGGCAAGTATCGAATGGAATTACCTGGATACAACACCATGCAACCATACTCTCATATGAATGAAAGGTGCCCATCTCTTCCTCCTAAGTATTCCAGAACCAAGGATTGTTAG 1575 0.4597 MAKKVAWLLLLLLISASVPGLKVWALKTPFHLRDVLPLLPRHVSWPIMTRLHSAVDILPVFVGAASSPDNALEWKGACFYENKAWMVFHNKSQTEYGGGTLHIKVSNAHSWTCMDLYIFATPYRVTWDYYFLAREHTLEIKAWEGKAEYDYVKNHGLSIFLLQAGMLGTLQALWEVFPLFSNTGWGENSNINFLEKHMGSSFEVRPQPWVTNVSADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDPNGKLWVGESGHEDEKGEDIIALMPWEEWWDFELTKDDSNPHIALLPLHPDLRARFNESAAWEYALSMIGKPYGYHNMIFSWIDTLNGNYPPPLDANVVACVMTIWNQLQPAYAANMWNEALNKRLGTEGLDLPDVLVEVEKRGSSFDELLTIPEQDDWVYSDGRSTSCIAFILEMYKEAGLFDPIASSIQVTEFTIKDAYILNFFENNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYSHMNERCPSLPPKYSRTKDC* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0264 524 Gene3D endopeptidase domain like (from Nostoc punctiforme) 217 383 - -
Vra6g0264 524 PANTHER OS01G0793500 PROTEIN 18 524 - -
Vra6g0264 524 PANTHER PLANT/F10M23-360 PROTEIN 18 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0264 Vra-Chr6 1959810 1965829 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0264 - - gmx:100796964 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0264 6 1959810 1965829 Vra6g0264 6 1959810 1965829 ECH