Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0240 ATGTCTGGAACCATCTTCCTCAACGCCAACGCCACCTTCAGGGTTCGCTTCCGAGCCCAGGCCCGTTCCACCTTACCCGTAAAGCCCACGCCCCTCACACTACCCACTCCCTACCCTCACTGGGCTTCCTTGCAGGCCGACATCGAAGCCCACCTAAAACAAGCCATTCCCATCAAAGAGCCGCTCGAGGTTTTCGAGCCCATGCACCGCCTCGTCTTCGACTCCCCCCGGACCACCGTCCCCGCTTTATGCCTTGCAGCCTGCGAGCTCGTGGGCGGGCAGCGCCGCCAGGCCATGGACGCTGCGGCGGCCCTGTTACTAAACCTGGCTAATGCGCACGTGCACGAGGAGCTTGGTTTGAGGGAGGGGTCCAACATAGCGCTGCTGACCGGGGATGGGATTGTTCCGCTTGGGTTTGAGTTGTTGGCGAGCGGCGACGGGCCGGGCCGTGGAAGCCCGGAACGGGTGATGCGTGTGATAATCGAGATATCACGTGCGGTGGGTTCGGAAGGGCTGATAGATTCGCAGCACATGAAGAAAACGTTGGAGGGGGGAAACATGAAGCGCGTGGTGGAGAAAGGGGAGGGTGGGTTGCATGCATGCGGCGCCGCCTGTGGTGCGGTGGTCGGAGGTGGGAGTGAGGAGGAGATTGAGAGGCTGAGAAGGTTTGGGTTTCATGTGGGCATGATGAGGGGAATGGCGCAGAGGGGTTTCCACAACCATGATGTTGAAGAACACAGAAATCTCGCACTCAATGAGTTGCAGTTTTTCAAGGACACAGATCTTCGAATGATCTCCACTTTTCTTAATTTCTACTAG 819 0.5836 MSGTIFLNANATFRVRFRAQARSTLPVKPTPLTLPTPYPHWASLQADIEAHLKQAIPIKEPLEVFEPMHRLVFDSPRTTVPALCLAACELVGGQRRQAMDAAAALLLNLANAHVHEELGLREGSNIALLTGDGIVPLGFELLASGDGPGRGSPERVMRVIIEISRAVGSEGLIDSQHMKKTLEGGNMKRVVEKGEGGLHACGAACGAVVGGGSEEEIERLRRFGFHVGMMRGMAQRGFHNHDVEEHRNLALNELQFFKDTDLRMISTFLNFY* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0240 272 Gene3D Farnesyl Diphosphate Synthase 38 271 IPR008949 -
Vra6g0240 272 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 7 270 - -
Vra6g0240 272 PANTHER HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE 7 270 - -
Vra6g0240 272 SUPERFAMILY Terpenoid synthases 39 229 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0240 Vra-Chr6 1796159 1797222 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0240 K13789 - gmx:100170743 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0240 6 1796159 1797222 Vra6g0240 6 1796159 1797222 ECH