Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0232 ATGGAGGAGCACACTTTCGTGTCCAAAGCGAGGATCGCCTTTCATTCTGCGGCGGCGAAAGCGGAGCGCGTGCTTATGGATTTCAAATCCGATCGAGATCACGATAGGCACTCGTCGCAGGAGGCGGATTCTCCCAACAACAACATCGAAAACGAGTCCAAGGAGGTTCGCAGTGAATTAAAGCATAAAAAGTGGAGGCCTCCACATATAGGAATAAAGCAGGATTGGCAAGATAGGATAAAGAACATCGGGAGAGGGAGAAAAGAAGTTGAAGATACTGATAAAGTTGGGGATGCGAACATGGCAGTTCCATTTTATGATGATAATTTGTACACCCTGAATGTGAAGAATGAACAAGATGCTAAGGCATCAGAATTATTTCCTTCAGTTGAAAGCCTAACTGCTGCAACTAAAGATCCCCTTCCTCCGTCATCTGTACTTAAGCAATTGGCTGTAGCTGTTGAGGCTGGAAGTAAAGTGAAGTCAATGAAAGAATTTATAGCTTCATCAGGAGGTTCTTCACCTGCTAAAGAGAGGGCAGGGTTGAGTCTCTCTGCTGTTAAGGCGTTAGTGCTACGTGAAAAGGAGGATGGTCAGACTTCAGAGTTTACTAGCAATGAGAAAGTTGTGCAGTTAATCAGTTCTTTGTTTGATCCAGAGGGAGATTTCCTTACAAGAAAGATCGACTCTAATACAGAGGAAACTGCCATGACATCGTTGCCAAGAGATATTCATGGTGCTCCTCCTGAAAGTCTTGTTGTTAAGCTAGCTGAAATCCTTGGAAACTACAGGACTGTCCGTAAAATGGCTCTTTTCTGGTGCTGTGTTGTTGCTGAAGTAAGAAAACTTTGGTCTGAGGAGCAACACTTACCAGGAGTCCCCAAGAACGAGATTCCTGATTTGAATTCATGTCTTCTATATCAACATTTTCAATTAATTAATTGCTGCATTTCTCGGAAAAGGTTCCGTGTTGTTGCCACTGAATCTCTAGATTCTATGGTGATGCAAGCTAGCTCAGACGCAAAAGAATCATCTAATTATAATGCTGGAGCTCCTGCAAGCCCTGTTCTATATGCTAGATTAAACAGTGGGGAGCTTGTTCTACGACTTGGTGCAAATCATCCTGCTGGAGATATGACATTGTTGGAAACTGGCGAGCCTGTGTATTCTCCGGTCACCCAGGACGGGCCTTTGCTTACTGAAGATCTAATCAGGGAAACAGAGGAGTTTGTGCTGCGGACTGGGAGTGTTGGAGCTGGGTGCTCTCAATTGCTCTCAGATATGCAAGCTTTCAAGGCTGCAAATCCTGGATGTATATTAGAGGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACGGACAATGAGGCAAGTGTAGAGGATAGTGATGTTTTTGATAGTGGTGAATCGTTGTCTGCCAAAGGTCAGCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTGTGGGAAACATCAAAACCAGTACCAGCTGTTAAGCAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCCATGCTTTTGAGGACATCCATCCTTCTGATCTTTTTGTACAGCTGTTTGTTTCTTTGCTTGGTTTAGGATTTGCAATTGCTGAACCTATGCTGTCTAGTAATAGTGACTTCTCGAAGTTATTCTATGACTGCAAGGAGTACATAATTGCCGCTTGTCAAAGCAACAAATTGCACGAGAAAGTTGATGATCTTGTCCAGGCATATGAAACAGTGGAGAGAATGTTATTAAATCCTGAAGAAGCACTAAAGATGATTAAGCAGACAGACGAATCAACTATGGTTACTGATGAACCAAAGAGCCCGTTGAAGAGGCTTAGACTTATCTTTGCCGGCAAAGATAAACTATTGAGGAAGTCTCTCTCAAAAGATCAGTTAAATGATGATGAAAAACCTGGTCGGCAATCATTCTCAAGTTTCTTTGATAGCAAGTCATCTTTGTTTTCAAAGAAGCCTCCAAAGTCTGGATCCCCATCTCCTGCTGAGAAATCTTCTCTAGATGTTAGTTGGACATCTGCATAG 2070 0.4319 MEEHTFVSKARIAFHSAAAKAERVLMDFKSDRDHDRHSSQEADSPNNNIENESKEVRSELKHKKWRPPHIGIKQDWQDRIKNIGRGRKEVEDTDKVGDANMAVPFYDDNLYTLNVKNEQDAKASELFPSVESLTAATKDPLPPSSVLKQLAVAVEAGSKVKSMKEFIASSGGSSPAKERAGLSLSAVKALVLREKEDGQTSEFTSNEKVVQLISSLFDPEGDFLTRKIDSNTEETAMTSLPRDIHGAPPESLVVKLAEILGNYRTVRKMALFWCCVVAEVRKLWSEEQHLPGVPKNEIPDLNSCLLYQHFQLINCCISRKRFRVVATESLDSMVMQASSDAKESSNYNAGAPASPVLYARLNSGELVLRLGANHPAGDMTLLETGEPVYSPVTQDGPLLTEDLIRETEEFVLRTGSVGAGCSQLLSDMQAFKAANPGCILEDFVRWHSPPDWTDNEASVEDSDVFDSGESLSAKGQLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEDLAVEGILHAFEDIHPSDLFVQLFVSLLGLGFAIAEPMLSSNSDFSKLFYDCKEYIIAACQSNKLHEKVDDLVQAYETVERMLLNPEEALKMIKQTDESTMVTDEPKSPLKRLRLIFAGKDKLLRKSLSKDQLNDDEKPGRQSFSSFFDSKSSLFSKKPPKSGSPSPAEKSSLDVSWTSA* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0232 689 MobiDBLite consensus disorder prediction 29 63 - -
Vra6g0232 689 MobiDBLite consensus disorder prediction 648 689 - -
Vra6g0232 689 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 682 - -
Vra6g0232 689 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 4 682 IPR045700 GO:0005096|GO:0043547
Vra6g0232 689 MobiDBLite consensus disorder prediction 639 689 - -
Vra6g0232 689 MobiDBLite consensus disorder prediction 48 62 - -
Vra6g0232 689 Pfam Rab3 GTPase-activating protein catalytic subunit 369 521 IPR026147 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0232 K18270 - gmx:100818643 1117.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0232 6 1723952 1732643 Vra6g0232 6 1723952 1732643 ECH
Vra6g0232 6 1723952 1732643 Vra6g0232 6 1723952 1732643 PCT