Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0223 ATGAAAACCCAACAACAAAGCATGCCATCTTCACCCTTATTGCCATTAACGATCTTGACACTGACCCTTCTCTCCCTTACCCTCGCTGCAAATGCTCAAGACTGCACTGAAGCATTCCTTAAACTTGCACAACAAAAAAACATCTCAGACTGTAAGAGATTACGCACTCTGGGGGCCGAGTTTGCATGGAAACTCCACGCCAACAGTTCTCACAACTCCACCCTCGTTGACATCTTGTTCGGTGCCACACTCAATGCCCCACAGGGGTGGATAGGCTGGGGTGTCAACCCTGGAAGAAGACCAGAGATGGTTGGCGCCAAAGCCATCATAGCCGTTAAACGCTCCGATGGAACGTGGCTTATGGGCACATACAACATCACCAAAGAGATCAGAAACGGCTGCAATCTTCTGCCATCAGAAATCGGAATCGTGTTGGATAAGTCGGTTGAGCAAGAGGTCGACAACTTGCACACCATGCATGTGAGATTGAACCTTTCTTCTCACGCCTATAACGTTACGAGGCTGAATCATATCTGGCAAGTTGGCTATGATATTGAAGGTGGCCGTCCCCTTGGACACCCCAAAACTCTCCGCAACGTCGACAGCACAGAGGTCATCGACTTGACCGACAGCAACGGTCGTAGCACCGGACAGTACCGGAGTTATCTTAGAACGATACATGGAGTCCTAAACATTATAGGATGGGGAACACTGTTGCCGATTGGAATCATAATTGCAAGGTACTTTCGGGTGTTTCCTTTCAAATACGACCCACTGTGGTTTAACCTGCACATTGGTTGCCAATTAACTGGTTTTCTGGTTGGCACCACCGGATGGGCTATCGGACTGAGCCTGGGCCATTCTTCCAGATACTACACCTTCCGCGATCATCGAACCTATGGCATTCTCATATTCACCTTTAGCACAATCCAGATGTTGGCTTTTCGGTTGAAGCCAAAGTTGACGGATGATTACAGGAAATATTGGAACATGTACCATCATTTTCTTGGTTATGGACTGTTGGCTATCATATTCATAAACATATTCAAAGGAATTCGGATATTGGAAGGAGGTGATGCATGGAAGTGGGGGTACGTTGCAGATCTTGCCTTTCTGGGTGCCATTGCTTTTGGTTTGGAGGTTTACACGTGGATTCACTTCTTCGGATTGAAGCAGAAAGAGAAACAAAAACAGTTAGAAGAGGCTATTAAACCTAAATCAACTCCACATTACCAGATATAA 1242 0.4646 MKTQQQSMPSSPLLPLTILTLTLLSLTLAANAQDCTEAFLKLAQQKNISDCKRLRTLGAEFAWKLHANSSHNSTLVDILFGATLNAPQGWIGWGVNPGRRPEMVGAKAIIAVKRSDGTWLMGTYNITKEIRNGCNLLPSEIGIVLDKSVEQEVDNLHTMHVRLNLSSHAYNVTRLNHIWQVGYDIEGGRPLGHPKTLRNVDSTEVIDLTDSNGRSTGQYRSYLRTIHGVLNIIGWGTLLPIGIIIARYFRVFPFKYDPLWFNLHIGCQLTGFLVGTTGWAIGLSLGHSSRYYTFRDHRTYGILIFTFSTIQMLAFRLKPKLTDDYRKYWNMYHHFLGYGLLAIIFINIFKGIRILEGGDAWKWGYVADLAFLGAIAFGLEVYTWIHFFGLKQKEKQKQLEEAIKPKSTPHYQI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0223 413 Pfam Protein of unknown function (DUF568) 103 208 IPR045265 -
Vra6g0223 413 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 16 400 - -
Vra6g0223 413 ProSiteProfiles Cytochrome b561 domain profile. 191 388 IPR006593 -
Vra6g0223 413 Gene3D - 208 398 - -
Vra6g0223 413 CDD Cyt_b561_FRRS1_like 201 381 - -
Vra6g0223 413 PIRSF UCP037471 7 412 IPR017214 -
Vra6g0223 413 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 16 400 - -
Vra6g0223 413 ProSiteProfiles DOMON domain profile. 57 182 IPR005018 -
Vra6g0223 413 SMART 561_7 226 352 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0223 Vra-Chr6 1665446 1667298 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0223 - - gmx:100791697 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0223 6 1665446 1667298 Vra6g0223 6 1665446 1667298 ECH