Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0192 ATGGATCATAACTGTAATTCGCCAAGAACACCGAGTTTTCGGCAAAGGAAACGCTCAAATGAGATTCCTGCAGAGATAAACAAATCAAATGGAAACATTTTATTGGTGGATGATAAATATAAATACAGATCAATGTGGATTCGTGCATACTCATCTCTGTGGATGTTAGCTAGTGTCTCACTCATCATTTACTTAGGTCATCTTTACATCTGGGCCATGGTTGTTGTTATCCAAATATTCATGGCCAGTGAGCTCTTCAATCTACTTACAAGAGCAACTCAAGATAGACGTCTCCCGAAGTTTAAGTTCTTGAACTGGCACTTTTTCTTCACAGCAATGCTTTTCGTATATGGCCGTATTCTCAGTCAGCAACTTGTGAATACTGTGACCTCGGACAAATTCTTGTATAGGCTTGTGAGCAATCTGATCAAGTATCAGATGGTTATATGTTACTTCCTATATATTGCAGGTTTTGTATGGTTTATTCTTTCATTGAAGAAAAGATATTACAAGTACCAGTTTGGCCAGTATGCATGGACACATATGATACTCATCGTTGTGTTTACCCAGTCTGCGTTCACTGTAGCCAACATATTTCAAGGAATATTCTGGTTTATTTTCCCTGCATCCCTAATTGCTATGAATGACGTTGGCGCATATTTCTTCGGTTTCTATTTTGGGAGAACACCTCTGATCAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTCATTGGAGCATCTGTTGCCACTATGATTGCTGCGTTTACATTTGCCTACTTCTTGGGTCGCTTCCAATGGCTAACATGTCCAAGGAAGGACTTATCAACTGGTTGGCTTCAGTGTGACCCTGACCCAATATTTAAGCCAGAGTACATTCCATTGCCAGGACTGATTTCTCATTCTCTTCCTTGGAAAGAGATACCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGTTGGGACTATTTGCGTCAATCATAGCACCATTTGGAGGTTTTTTTGCCAGTGGTTTCAAAAGAGCTTTTAAAATCAAAGACTTTGGTGACAGTATACCGGGACATGGTGGATTTACAGACAGAATGGACTGTCAGATGGTAATGGCTGTTTTTGTCTACATTTACCATCAATCATTTGTCGTCGTCGAAGACTATTCAGTAGAAATGCTTTTGGACCAGATATTGAGGAACCTTGGTTCAGAGGAGCAGCTGTCTCTCTACGCAAAACTCGGACATATATTGCAAGAAAGGCGTTTATGA 1254 0.4035 MDHNCNSPRTPSFRQRKRSNEIPAEINKSNGNILLVDDKYKYRSMWIRAYSSLWMLASVSLIIYLGHLYIWAMVVVIQIFMASELFNLLTRATQDRRLPKFKFLNWHFFFTAMLFVYGRILSQQLVNTVTSDKFLYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFQGIFWFIFPASLIAMNDVGAYFFGFYFGRTPLIKLSPKKTWEGFIGASVATMIAAFTFAYFLGRFQWLTCPRKDLSTGWLQCDPDPIFKPEYIPLPGLISHSLPWKEIPVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVVEDYSVEMLLDQILRNLGSEEQLSLYAKLGHILQERRL* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0192 417 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 2 416 IPR016720 GO:0004605
Vra6g0192 417 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 2 416 - -
Vra6g0192 417 ProSitePatterns Phosphatidate cytidylyltransferase signature. 335 361 IPR000374 GO:0016020|GO:0016772
Vra6g0192 417 PIRSF CDP-DAG_synth_e 2 417 IPR016720 GO:0004605
Vra6g0192 417 Pfam Cytidylyltransferase family 47 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0192 Vra-Chr6 1411304 1415771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0192 6 415 Lipid Metabolism Gene Families AT4G26770 75.829 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0192 K00981 - gmx:100805363 791.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0192 6 1411304 1415771 Vra6g0192 6 1411304 1415771 ECH