Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0181 ATGGAAAGAAGCAAATGTATGGAAATGGAAGGAGAAATGAAGAACATGATCAAGGTATGGGTTTCAGTCCTAATCTCACTTTCTTACTGTTATTTCATTTCTTCAAAGCTACCCAAAGGAATGTTCAGATTTCTGTCACTCTCACCTGTGTTGTACCAATTCTCCATGCTACCTCTTCAATTCACCACTGTCCTACCGACAGGTGTCACTGCCTTGTTCATCACTTGGCTCACCAACTCCAAACTTCTCCTCTTCGCTTTCGATTTGGGACCTCTTCCTTCAAACTCCAACTCCCTCCTTCGCTTCATCTCCTTTGCATCTCTCCCAATCAGACAAACCCTAAAAACCAAATCAAATTCAAATCTCACTTCTCATCCCATTTTTCTCCCAATCAAGACCTTCCTTTTTCTACTCTTTCTCTTACCCATCAAACAAAAACTTCACCCTGCACTTGTTCTTTCCAGCTATTGCGCCATTGTCTATCTTCTTGTCGATATTGCTATGGGACTCTGCAACATTCTCGTCGACGCCACGTTTTCCGTTGAGCTACAGTTACCGTCCGATGACCCTTATCTCTCAACCTCGCTGCGTGATTTCTGGGGGAGAAGGTGGAACCTCATAGTAACGCATACGCTGCGACACACCGTATACAATCCCGTCAGATCGCTACTGAGAAATACCGTATTGGGCCCCCAGTGGGCCTCGGTGTTCGGCGTCATGGCATCTTTCTTGGTGTCTGGGTTGATGCACGAGCTTCTATTCTACTACGTCACACGTGTCTCTCCCACGTGGGAGGTTACGTCCTTCTTTCTGCTCCACGGGGTTTGCGTGGTTGCGGAGTTTGGTGCGGTGAAGTGGTTGGGCCATAAATGTAGACTGCATTGGGCCGTTTCCGGACCCATTACTGTGGGGTTCGTGATCACCACCGCCGCGTGGCTCTTCTTTCCACCGTTGATGCGTACTGGCACGGGCGAGAGATCCATCAGGGAGTTCAGCGACGTTGTTGAGTGTGTTATGGGAATATTTTACTAG 1032 0.4787 MERSKCMEMEGEMKNMIKVWVSVLISLSYCYFISSKLPKGMFRFLSLSPVLYQFSMLPLQFTTVLPTGVTALFITWLTNSKLLLFAFDLGPLPSNSNSLLRFISFASLPIRQTLKTKSNSNLTSHPIFLPIKTFLFLLFLLPIKQKLHPALVLSSYCAIVYLLVDIAMGLCNILVDATFSVELQLPSDDPYLSTSLRDFWGRRWNLIVTHTLRHTVYNPVRSLLRNTVLGPQWASVFGVMASFLVSGLMHELLFYYVTRVSPTWEVTSFFLLHGVCVVAEFGAVKWLGHKCRLHWAVSGPITVGFVITTAAWLFFPPLMRTGTGERSIREFSDVVECVMGIFY* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0181 343 PANTHER (MEMBRANE BOUND O-ACYL TRANSFERASE) FAMILY PROTEIN, PUTATIVE-RELATED 9 339 - -
Vra6g0181 343 Pfam Membrane bound O-acyl transferase family 189 271 IPR032805 -
Vra6g0181 343 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 9 339 IPR044851 GO:0006629|GO:0008374
Vra6g0181 343 PIRSF Wax_synthase 9 343 IPR017088 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0181 Vra-Chr6 1344456 1345733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0181 9 338 Miscellaneous Gene Families AT5G55340 43.373 5.11e-85 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0181 - - var:108337546 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0181 6 1344456 1345733 Vra6g0181 6 1344456 1345733 ECH