Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0169 ATGGCGACGCCAGATTCTGACGCTACTATTCAGCCTCAAGATTCTGATTCTCTAGCCAATCCTAGTCCTCCCAACGCTCTGGTCCCCGCCGCTCCTGCCGTTTGCCTCCTTCGCTTCGCAACCGACTCAGCCGGTGGCGCTCTCATGGGCTCTGTCTTTGGATACGGTGCTGGATTATTTAAGAAGAAAGGTTTTAAAGGCTCCTTTGTAGAAGCGGGGTCTTATGCAAAGACATTTGCAGTTTTGTCTGGAGTTCATAGTTTGGTTGTTTGCATCTTGAAAAGACTTAGAGGAAAGGATGATGTCATTAATGCGGGGGTGGCTGGTTGTTGCACTGGTCTTGCTCTAAGTTTTCCAGGTGCTCCACAAGCTCTTTTGCAGAGCTGTCTTACCTTTGGGGCATTTTCTTTTATTATGGAAGGGCTAAACAAGCAGCAACCAGCACTTGCAGTTCCTATGTCCTTGAAAAAAGGATCTGTGCAATACAATGCTCGTCCTCCCCTGGCACTCTCCCTTCAACTCCCTCTTCCAGAAGAACTAAAAGAAGCCTTCTCTTTTTTCTCCGAGTCTCTGAAGCAGCGCAGCAAGGGATCTTACCCAACATCTCAATAA 612 0.4788 MATPDSDATIQPQDSDSLANPSPPNALVPAAPAVCLLRFATDSAGGALMGSVFGYGAGLFKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIMEGLNKQQPALAVPMSLKKGSVQYNARPPLALSLQLPLPEELKEAFSFFSESLKQRSKGSYPTSQ* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0169 203 Pfam Tim17/Tim22/Tim23/Pmp24 family 39 136 - -
Vra6g0169 203 MobiDBLite consensus disorder prediction 1 22 - -
Vra6g0169 203 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 21 182 IPR039175 GO:0042721|GO:0045039
Vra6g0169 203 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATED 21 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0169 Vra-Chr6 1236038 1238131 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0169 5 196 Miscellaneous Gene Families AT4G26670 66.495 1.34e-84 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0169 K17790 - gmx:100813557 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0169 6 1236038 1238131 Vra6g0169 6 1236038 1238131 ECH