Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0156 ATGGCACTCGAATCTTGGGTTCTGAGTTATCAAAGCTTCAACCCCAGTTCCAGATTGTTCTACACTGCACATGAAAATCGGCGAAAGAGCATACCAATCAACTTTTTGGGTAGAAACAGTAGATATTCATTTCCCTTTGTTTCCAGTTGTGTTGGTCCATCCACTTTTTCAACCCTGCAGGTTTCAAGTTTTGGGGCAGATGCCAAGTTACTAGATAGAACTCGGTTGAGGTGTTTAGATGGTAGCAGTGATGGTTTGAGTGAGAGAAATGCTGTTTCCGAAACCAATTTGAAGTTTATGCATGAATTGTTGAAGAGGGGAATCATCCTAGCTGCAACTGTTTGTGGGGTTTTGGTGTTTGGATGTCCACGAGTTTTCGCAGTTGAAGATGTTGTGGATGCAGGATATGGCGTTATTGGACAGAGCATACTTTTGCTTAGAAATACTTGGCCTAAAGTGTTGCAAGTTCTTCGCATATTCAAGGAGCAAGGTTTGGTGCTGGCACTGCTTTTGGGCATTTCGGCCTTTTTCTCTATGGCAGAGACTTCAATAACCACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAGGAGTCCGAAAATGGCGTTTTCAGACTACTTCGAAGTGACGTTACGCGGTTCCTTACAACAATACTTATTGGCACAACGGTGGTCAATATTGGGGCAACTGCACTGGTCACTGAAGCAGCGACTGCAATGTTTGGTGAAGCTGGTGTCAGTGCTGCAACAGGAGTGATGACTGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAAAGCATAGCTGTTCATAATGCCACTGAGGTGGCTCGTTTTGTGGTCAGGCCAGTGGCATGGCTTTCCCTGGTGTTGTATCCTGTAGGAAGAATTGTTACTTATCTTTCAATGGGGATGCTGAAATTGCTTGGCCTAAAAGGAAGAAGTGAGCCATATGTGACAGAAGATGAGCTAAAATTGATGCTAAGAGGTGCAGAATTAAGTGGGGCAATAGAAGAGGAAGAACAGGATATGATTGAAAATGTTCTAGAGATAAAAGATACACATGTCAGAGAGGTTATGACCCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTGGTAGACTTTCATCACTTGTGGGTCACACATCAGTACTCAAGGGTACCTGTTTTTGAGCAACGCGTTGATAATATAATGGGTATAGCGTATGCAATGGACCTGCTGGATTATGTTCAAAAGGGGGAGTTGCTGGAAAGTACTACAGTTGGAGATATGGCTCACAAGCCTGCTTATTTTGTACCTGATTCAATGTCTGTTTGGAATCTTCTTAGAGAGTTCAGAATCAGGAAGGTTCACATGGCGGTTGTTCTTAATGAGTATGGTGGAACTGTGGGGATTGTAACACTCGAAGATGTTGTCGAGGAAATTGTTGGTGAAATCTTTGATGAAAATGACTCAAAGGAGGAGATTCAGAAAAAAACTGGTTACATAGTAATGCGAGCTGAGGGTATTTTTGATGTGGATGCAAACACATCTATTGATCAGCTCTCAGAGGATTTGAACATCAAGATGCCGGAGGGTCATCAATATGAGACAGTATCAGGCTTTGTGTGTGAGGCATTTGGATACATTCCAAGGACAGGTGAGTGCATCAAAGTAGTTCTTGAAAGGGAGGATGAAGATGATAACAATGAGTCCAGTGCTGACCAGCAGGATCAGAAGCAAAAGAATCAAACTTTCAAACTTGAGATACTAGCTGGAAATGCCAGAAAGGTGAGCGCAGTTCGGTTTGAAAGAATAAATAATAATGATGAGATGTTGGAGACTAAAGTCACTCGCATGGTCCCCAAAATCATGAAGAGAAAATGGAACAACGCTGAAAACTTGGAGGATGATACAGAATATGATGGAGATACATTTGCAAAGAAACCACATGATGACATTTCTAGTGAATATTTAGTTGATCAGGAAAGTTCTAGTACAAAATAA 1998 0.4209 MALESWVLSYQSFNPSSRLFYTAHENRRKSIPINFLGRNSRYSFPFVSSCVGPSTFSTLQVSSFGADAKLLDRTRLRCLDGSSDGLSERNAVSETNLKFMHELLKRGIILAATVCGVLVFGCPRVFAVEDVVDAGYGVIGQSILLLRNTWPKVLQVLRIFKEQGLVLALLLGISAFFSMAETSITTLWPWKVRELAEKESENGVFRLLRSDVTRFLTTILIGTTVVNIGATALVTEAATAMFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTYLSMGMLKLLGLKGRSEPYVTEDELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKGELLESTTVGDMAHKPAYFVPDSMSVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRAEGIFDVDANTSIDQLSEDLNIKMPEGHQYETVSGFVCEAFGYIPRTGECIKVVLEREDEDDNNESSADQQDQKQKNQTFKLEILAGNARKVSAVRFERINNNDEMLETKVTRMVPKIMKRKWNNAENLEDDTEYDGDTFAKKPHDDISSEYLVDQESSSTK* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0156 665 ProSiteProfiles CBS domain profile. 428 486 IPR000644 -
Vra6g0156 665 ProSiteProfiles CNNM transmembrane domain profile. 156 342 IPR002550 -
Vra6g0156 665 Gene3D - 498 600 IPR016169 -
Vra6g0156 665 PANTHER BNAC03G73630D PROTEIN 83 661 - -
Vra6g0156 665 Gene3D - 336 491 IPR046342 -
Vra6g0156 665 Pfam Cyclin M transmembrane N-terminal domain 166 342 IPR002550 -
Vra6g0156 665 SUPERFAMILY FAD-binding/transporter-associated domain-like 499 607 IPR036318 GO:0050660
Vra6g0156 665 ProSiteProfiles CBS domain profile. 361 422 IPR000644 -
Vra6g0156 665 CDD CBS_pair_CorC_HlyC_assoc 356 477 IPR044751 -
Vra6g0156 665 MobiDBLite consensus disorder prediction 628 665 - -
Vra6g0156 665 PANTHER HEMOLYSIN-RELATED 83 661 - -
Vra6g0156 665 SUPERFAMILY CBS-domain pair 344 483 IPR046342 -
Vra6g0156 665 Pfam CBS domain 357 415 IPR000644 -
Vra6g0156 665 Pfam CBS domain 425 480 IPR000644 -
Vra6g0156 665 SMART CorC_HlyC_2 501 604 IPR005170 -
Vra6g0156 665 Pfam Transporter associated domain 502 603 IPR005170 -
Vra6g0156 665 MobiDBLite consensus disorder prediction 561 581 - -
Vra6g0156 665 MobiDBLite consensus disorder prediction 628 655 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0156 - - gmx:100778907 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0156 6 1133242 1141155 Vra6g0156 6 1133242 1141155 ECH