Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0143 ATGTCGTTGGGAATCCTTCGATCTCGCGCGGTTTCATCCGTATCGAAGCGATTCCTCTGCACCAATACAGCTTCTGCTCCTCTTCCTCCTCCTCCTTCTCCTAATGCAGCTTCCGCTCCTCTCCCTCCTCCTCCTTCTCCCAGGCGCTGGAATTTCCTCAAATACGCCATTGTCGGCGCACTTACCGGAGCCACCGGCTTTGCCGGTTACGCTTCTTACGCTTACAGCTTGGAGGAAATAGAAGAGAAAACGAAGTCCTTCCGTGAGTCTGCCAAACACACTGCTGCTGATGGAGGCACTGCGCTCGATAAATTTCAAAGTTTGCTCTATTCAACTGCAATGGCAGTGCCTACTAAAGCAGTGGAGTTTTATTTGGATTCAAGAAGGCTAATTGAAGAACTAGTTCAGAGTTATACTGAACCATACACGGACAAGCTACTTCCTGATTTGCTTCCTCAGGAGCAACATGTGTTTACCCTTGTTCTTGATCTGAATGAAACATTGATTCACTACATTTGGACGCGAGATACAGGTTGGCAGACTTTCAAAAGACCTGGAGTTGATGCCTTCTTGGAACATTTAGCTCAGTTCTATGAAATAGTAGTGTACACTGACGAACAGAATATGTTTGTTGACCCTGTTATAGAAAGGCTGGATACCAAGCATTGCATTAGATATAGGCTGTCAAGGCCAGCTACTAAGTATCAGGATGGGAAACACTTTAGAGATCTTTCTAAACTAAACAGAAATCCAGCAAAAGTCCTTTATTTAAGCGGCCATGCTCTGGAAAGTTGCCTGCAGCCCGAGAACTGTGTCCCCATTAAGGCATGGCAGCAGCAAGATATAGATGACACGGCCCTTTTGGATTTTATACCATTTCTTGAGTTTGTTGCCCGTAGTAGTCCATCTGATATAAGACCAGTGCTAGCCTCTTACGAAGGATGTGATATTCCCAGTGAATTTATCAGGCGTTCCAAAGAGCATCAGAGGAGAATGCAAGAACAGAAGCATCGTGGTCGCTTCTGGAAATAA 1032 0.4545 MSLGILRSRAVSSVSKRFLCTNTASAPLPPPPSPNAASAPLPPPPSPRRWNFLKYAIVGALTGATGFAGYASYAYSLEEIEEKTKSFRESAKHTAADGGTALDKFQSLLYSTAMAVPTKAVEFYLDSRRLIEELVQSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRNPAKVLYLSGHALESCLQPENCVPIKAWQQQDIDDTALLDFIPFLEFVARSSPSDIRPVLASYEGCDIPSEFIRRSKEHQRRMQEQKHRGRFWK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0143 343 PANTHER OS05G0513200 PROTEIN 24 335 - -
Vra6g0143 343 SMART forpap2 156 285 IPR004274 -
Vra6g0143 343 Gene3D - 143 327 IPR023214 -
Vra6g0143 343 Pfam NLI interacting factor-like phosphatase 159 306 IPR004274 -
Vra6g0143 343 CDD HAD_FCP1-like 158 274 - -
Vra6g0143 343 SUPERFAMILY HAD-like 145 310 IPR036412 -
Vra6g0143 343 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 24 335 - -
Vra6g0143 343 ProSiteProfiles FCP1 homology domain profile. 153 297 IPR004274 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0143 K17496 - gmx:100803155 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0143 6 1011657 1016474 Vra6g0143 6 1011657 1016474 ECH