Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0121 ATGGGTAGCAACGGATTGAGGTACGAGATCGCACAAAACGCTTACATCAAACTCGTGCTTCACTCCCTCAAACACCCAACCTCCGCCGTCAACGGCATCTTGATCGGTCGCATCTCCCCTTCCAACGACGTCGTCGAGATCGCCGATGCCGTCCCTCTCTTCCACTCTCACATTCCTCTACTTCCGCAATTGGAGATATCTCTCATTCTGATAGAGGAATATTTTTCTGCAAAAGGGTTGAACATAGTGGGCTATTTTCACGCGAATGAGAGATCTGATGACAGTGAGCTTGGAAGTGTGGCCAAAAATATCGGTGACCACATATGCCGCTACTTTCCTCAAGCCGCCGTTCTATTGTTAGATAACAAGAAGCTTGATGCTTTGAAAAAGAGCAAGGAACGTAGTGCCATAATGCAGCTTTATGTTAGGGATACATCTAAGAACTGGAAGTTGGTTTCCTCTGATGCAAACCGTTTCTCTCTCAAAGAGCCATCGGCAAATGTAGTCTTATTGGACTATATTGCAACTGAGAAGTGGAATGGAATTGTAGATTTTGATGATCATTTGGATGACATTAGCAAGGATTGGCTAAACCCAGGGCTGTTCAACTGA 612 0.4526 MGSNGLRYEIAQNAYIKLVLHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLILIEEYFSAKGLNIVGYFHANERSDDSELGSVAKNIGDHICRYFPQAAVLLLDNKKLDALKKSKERSAIMQLYVRDTSKNWKLVSSDANRFSLKEPSANVVLLDYIATEKWNGIVDFDDHLDDISKDWLNPGLFN* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0121 203 ProSiteProfiles MPN domain profile. 8 139 IPR037518 -
Vra6g0121 203 Pfam Uncharacterised protein family (UPF0172) 8 200 IPR005366 GO:0072546
Vra6g0121 203 PANTHER BNAA03G11160D PROTEIN 1 203 - -
Vra6g0121 203 CDD MPN_UPF0172 10 198 IPR005366 GO:0072546
Vra6g0121 203 PANTHER ER MEMBRANE PROTEIN COMPLEX 1 203 IPR005366 GO:0072546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0121 K23569 - gmx:100527135 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0121 6 862186 864432 Vra6g0121 6 862186 864432 ECH