Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0120 ATGAGCGGCGGTGGTGGCTCTTCCACTTTTAGGGTTCCGATCCCAAACAATGTACGAAAAACCATCCAAGACATCCGCGAGATCACCGGCAAGCAGCACACCGACGACGAAATCTACGCCGTCCTCAAAGAATGCTCCATGGATCCCAACGAAACCGCTCAGAAGCTTCTCTATTTAGATACTTTTCATGAGGTGCGAAGGAGACGTGACCGAAAGAAGGAGGGATTGAGCAACAGGGTTTCTGACGAGCCTAGGATAAAGCAAGGTGGACAAGGGAGAGGGGGAAGGGGTGCTTCAGGAGGATATTCCTCTAACTTTCCTGATGGTGGTGGTGGGAGGAACATAGCTAATCGAAGGGAAAATGGAGTCAATCACATTGCAGAGAGAAGTCATGGTCCCTCTACTCAGCCTGTATCGCATAAAACTAAGACTACTACCACATCTCAAGTTACAAGAGTTTCAGCTGTTGCACCTCCTGCTGCTGCAAATCAATCCAATGGGAAGTCTGTTCACGTGTCTGCTGGTCAATCTCCCATTGTTAGTGTACCTAAAAGTGGTTCAGCTGGTAATGAGACTGGCTATGAAGAAAGTGTCCAACCTCAAGCTGCTGCTGTTGCCACACCCTCTTTCCTTACTCAAACCTTTGGCTTAGTTACTAGTACCGACCAAGGAAAGTCTTTGTCAAGTTCTGATCAGCTTCAAACTTCCGCCATGGGTGTCCATTCTTCTTTGGATCCTGTTGTAGCATCTTCTGTCTCCCGGCATTCTGGTGTGAGTGGTGCAATCAGCAGGGAAGTTGGAAGCAACCGGATATCCACTGGACCAAATCATGTTAAAGGAAATAAACTTGTTCAAGAAGTTAATGATTTATCAGCATCCAAGAATGATAAATCTGGGATCGTGAGTTCTACAATTAAAACAAATACCCCACAAAAGTCAAACGAAGTTGAACATAATCAGTTATCTGAGCCCTCACAACTCTTATCTCTATCCCCAAATGATTCATTGAGGCCATCTTCTAGTTCTGGCAGCCAGCCACCTCTAGCTAATATCACAGAGGTTTCAACTTCAGAAGCTTGTGTGCAATCTTCAGCGGAGTTAAGGCAACATGTTACATTTCCAAACCATTTCCAAGTACCGGAGGCTTTAAAAAGTGGTCTGACATTTGGAAGCTTTGATACCTTTAGCCCAAGTGAAAAATCTAACAGTGGAACTGATGGGGACAATAATGCTTCTCGTGCTCTTGAACCTTCACCAGTGAGCGATGAAGCGGCAACTTCAAGCAACCAAAATGCATCATTAACTTCACAAGGGGATCATCTTGATTATCCACATTCTTCATCTTATTTGATTGAAAAGACACCAGCTACAGAAGGCAATTCTATAAATGGTGCTGAAACAAAGGTTGATCAGCCAAAGAAGGAGGTTTTGTTGGCCCCCGAGGCCCCTCAACTGCCAACTGTTCAAACCCCTCAAAACTACGGTTTGAATTTCATGTCCACCATGTTAGGGACTCAGCAGGTTCAATTTGAGGGAACTGAGCCCCAGGCACAAGATACATCTCGTTTTTCTAACTTTGTTAATGCAAGTTCTCAGGCTGTGTCCCCTAGCCCAACCCCACCCTTACAGAGTTCTATACCTGTGTCTCCACAGTCAGTTTCTATTTTCAGGCCACCCTACCCTACTAACTTCTTCCCTTATGGCCACTATTACCCACCAATTTATGTGTCTCCCATACACCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAACAGCTGCTGGCATCAAATTCCCACTCCCCCAGTTCAAGGCAGGAGCAAACACAGGAAATGCAGCTCATATTGGAATTCCTTCTGGGTCATTTATCCCTCCCCCTGTAGGTTATGCTCCAGGACAAACAGTTAGTACCGGCAGTTCCACTGGAAATGAAGATCTTGCTGTGTCGCAGTTAAAGGAAAACCAGATCTATACAACAGGACAGCTGAGTGAAGGCTCTGCAGTGTGGATTCCTGCTCCAGGCCAAGACATATCCAGTTTGCAAGTTAATTCTCTGTATAACCTTACCCCTCAGGGACAACATCTTACCTTCCCCCCAACACAGGCTGCGCATGGAGCATTTGCTGGTATCTATCAAGCAGGACAGGCAGTAGCTTCACCTTCAACCCTTTTGCAACAGTCTCAAGCTGTGGCTGGGCCCGTTGAAACTGTAGGGCCCCCTTCAGGATCTTATCAGCAACCTCAGCCTGCGCAGATCAATTGGAACTCTAATTTTTAG 2304 0.4605 MSGGGGSSTFRVPIPNNVRKTIQDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLSNRVSDEPRIKQGGQGRGGRGASGGYSSNFPDGGGGRNIANRRENGVNHIAERSHGPSTQPVSHKTKTTTTSQVTRVSAVAPPAAANQSNGKSVHVSAGQSPIVSVPKSGSAGNETGYEESVQPQAAAVATPSFLTQTFGLVTSTDQGKSLSSSDQLQTSAMGVHSSLDPVVASSVSRHSGVSGAISREVGSNRISTGPNHVKGNKLVQEVNDLSASKNDKSGIVSSTIKTNTPQKSNEVEHNQLSEPSQLLSLSPNDSLRPSSSSGSQPPLANITEVSTSEACVQSSAELRQHVTFPNHFQVPEALKSGLTFGSFDTFSPSEKSNSGTDGDNNASRALEPSPVSDEAATSSNQNASLTSQGDHLDYPHSSSYLIEKTPATEGNSINGAETKVDQPKKEVLLAPEAPQLPTVQTPQNYGLNFMSTMLGTQQVQFEGTEPQAQDTSRFSNFVNASSQAVSPSPTPPLQSSIPVSPQSVSIFRPPYPTNFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNMYLPTAAGIKFPLPQFKAGANTGNAAHIGIPSGSFIPPPVGYAPGQTVSTGSSTGNEDLAVSQLKENQIYTTGQLSEGSAVWIPAPGQDISSLQVNSLYNLTPQGQHLTFPPTQAAHGAFAGIYQAGQAVASPSTLLQQSQAVAGPVETVGPPSGSYQQPQPAQINWNSNF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0120 767 MobiDBLite consensus disorder prediction 259 355 - -
Vra6g0120 767 Pfam GBF-interacting protein 1 N-terminal 14 74 IPR009719 -
Vra6g0120 767 MobiDBLite consensus disorder prediction 128 193 - -
Vra6g0120 767 MobiDBLite consensus disorder prediction 395 446 - -
Vra6g0120 767 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 2 767 - -
Vra6g0120 767 MobiDBLite consensus disorder prediction 68 193 - -
Vra6g0120 767 SUPERFAMILY UBA-like 14 76 IPR009060 GO:0005515
Vra6g0120 767 MobiDBLite consensus disorder prediction 395 443 - -
Vra6g0120 767 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 767 IPR044277 -
Vra6g0120 767 MobiDBLite consensus disorder prediction 259 279 - -
Vra6g0120 767 MobiDBLite consensus disorder prediction 286 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0120 Vra-Chr6 847914 855260 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0120 - - gmx:100815261 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0120 6 847914 855260 Vra6g0120 6 847914 855260 ECH