Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0117 ATGGACCTTGTCCCTTATTCTGATCCTAACTCTGCCACGGCCACCCCACCGTGGCACGACATGTTCCGATCCGCTTCCCTTCGAAAGCCCTCCTCGGATCCTGCGCCGCCGCCGCCGCCTAATGCGGACCAAAAAGTCAACCCCTCGGGCGACTCTCAGGCGCGACTCGCCCTTTACATAGCCATGGCCCATGCCGGCCTCGCCTTCGCCATTCTCATCCTCTTCTCTCTCTACAAACTCCTGCAACAATACCTCAAACCCCTTCAATGGGCCATCTTATGCTCCATTCCTCTCAGACTCATTCACCAAGCCATCGTTTCCTTTTGGTCTCACCCTCTCAAATTAGGCCTCCTCCACACTCTCCTCGCTCTTCCGCTCACCGTTTTCTCGCTCTTCCTTACCAGCCTCGCTGAGATTCGCCAAACTTCTCTCACAATCCTTCTCCGGAAACCAAAGGCCCAGAACGAGGAGTCAAAGAAGCTTAGTGCGTTTTCCACTTTGCTTCGTCTGCTCTTTTCTTTTGCGGTCTTTGTTTTTGCTTATGAGAGGCTCGGTACTGTTGGGTCGTTGTCACTTCTCGGATTAGGCTTCGTTTTCAGTTCCAAGAATGTGGCTTTCAGTTTCTCTCCCTTTGGTGCGTCTTTCACCAGAGTGATATTGAGGAGGTTGAAAACCGTGGTGGCTGTTGGGTTGATTGTCGGCATGATTGTCGGGTTCTTGACAGGGGTGATTTTCTTCTCTTATAAGATTGGCGGTGAAGGGAAGGAGGCAGTGATTTCGTTGAAATTGCGAGTGGAAGAGAACAACTATGCTGAGAGAATCGGTGTGACGAAGTGGATTGAGGACAATGATATTGCTGGAATGGTGGATAAGTACTCCAGTCAGTTTTATGAGACGGTTTCTGATCAGATTGATGGGTTGGCAGCGCAGTACAATATGACTGAATTTGTGACGGTTGTTAAGCAATTTGTGATAACTGCTCCTGCTACTGCTAACTCTTCTCAGCCTTCAATGGATTCATTAGTGGTGGTTTCACCGCTCGCGGAAAGGATCTTGAATTTGAAGGGTATGGTTAGGAAGAGGGAGTGGGGGGGAATTTATGCAGAAGTCAATACCCTTTTCCGAGAGCTTATAATCACTAGGGAAGATTTGGTTGAGAGGGCAAAAGGGTATGCAGTTAAAGGGATGGATGTAGGTCAACGTGTTTTGGCTAGTGGTACAAGTGTGCTTGGAAGCGGTGCAAAGTTTGTGCTTTCCATTTTGAATTCCATAGTCTCTGGTGCTGCGGAGGTATTCAATTTTGTGTCTCAAACGATGGTTTTTTTCTGGGTTTTGTATTACCTCATAACATCAGAGTCGGGTGGGGTAACAGAACAAATGATGCACATGTTTCCAATTTCAAACTCGGCTAAGGTAAGATGCGTTGAAGTGTTGAATAAGGCAATTTCAGGAGTCCTTTTGGCCACTCCTGAGATTGCATTCTTCCAAGGATGCCTGACTTGGCTTTTGTTTAGGCTATACAGAATACATTTCTTGTATGTGTCAACTGTGCTTGCCTTTATTAGCCCTTTGATTCCGATATTACCGTCTTGGCTTGCAACAATTCCAGCAGCACTACAGCTAGTGCTAGAAGGAAGATACATAGTGGCCATTTTCTTGTCTGTTGCTCACCTTTTTCTCATGGATTATGGTGCAACTGAGATTCTGGAAGATGTGCCCGGACAAAGTGTTTATCTTACTGGAATGAGCATCATTGGGGGAATTGCTTTGTTTCCATCTGCTGTAGAGGGGGCTATTATGGGGCCATTAATAACTACAGTCATGATTGCTCTGAAGGATTTATATGCTGAATTTGTCTTGGGAGAGCATGATGACAAGGTGAAGCAGAAGGAAAATTAG 1899 0.4666 MDLVPYSDPNSATATPPWHDMFRSASLRKPSSDPAPPPPPNADQKVNPSGDSQARLALYIAMAHAGLAFAILILFSLYKLLQQYLKPLQWAILCSIPLRLIHQAIVSFWSHPLKLGLLHTLLALPLTVFSLFLTSLAEIRQTSLTILLRKPKAQNEESKKLSAFSTLLRLLFSFAVFVFAYERLGTVGSLSLLGLGFVFSSKNVAFSFSPFGASFTRVILRRLKTVVAVGLIVGMIVGFLTGVIFFSYKIGGEGKEAVISLKLRVEENNYAERIGVTKWIEDNDIAGMVDKYSSQFYETVSDQIDGLAAQYNMTEFVTVVKQFVITAPATANSSQPSMDSLVVVSPLAERILNLKGMVRKREWGGIYAEVNTLFRELIITREDLVERAKGYAVKGMDVGQRVLASGTSVLGSGAKFVLSILNSIVSGAAEVFNFVSQTMVFFWVLYYLITSESGGVTEQMMHMFPISNSAKVRCVEVLNKAISGVLLATPEIAFFQGCLTWLLFRLYRIHFLYVSTVLAFISPLIPILPSWLATIPAALQLVLEGRYIVAIFLSVAHLFLMDYGATEILEDVPGQSVYLTGMSIIGGIALFPSAVEGAIMGPLITTVMIALKDLYAEFVLGEHDDKVKQKEN* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0117 632 MobiDBLite consensus disorder prediction 1 48 - -
Vra6g0117 632 PANTHER TRANSMEMBRANE PROTEIN 1 626 IPR002549 -
Vra6g0117 632 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 626 - -
Vra6g0117 632 Pfam AI-2E family transporter 412 614 IPR002549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0117 Vra-Chr6 833529 836489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0117 - - gmx:100814206 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0117 6 833529 836489 Vra6g0117 6 833529 836489 ECH