Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0104 ATGTTTGGGAGGGGAACGGTGTGGTCAGTGTTGAGGCGCGGCAAAGAAGCAATCGGAATTCCCAAGTTAAGAGGAACGACGACGTCTTTCTCTTCTTCAACCCAAACACCAGCTTTGAAGTTTCTAACTCCTCCCGTCGCCACCCATTACATTTATGCTTTCCGATCGCAACTTATTCCCAAGGGTCATCATGTTCGTGTATCATACACAAGGAATTTTTCTAAGATGGTGGCTGCTGGGGCTCAACACAAGGAAGAGGGATTGAAGCTACTTGTGAGTGGGGGTCCTCATGCACAGAAAATGATTGGAATATGGCTCTTTGGCTCTGCAGCATGGGTGTTCAGCATGGTGATGCTTGGGGGTTTAACCAGACTCACCCGATCTGGTCTTTCAATGACTGATTGGAAATTCACCGGCACTCTCCCCCCTTTGACAGATGAGGAATGGTTGCAAGAGTTTGACAAGTATAAGGAGTCACCTGAGTACAAACGTGTCAATAGAGGCATGAAGATTGAAGAATTCAAATTCATCTATTGGATGGAATATGCACATCGTATGTGGGGAAGGGCATTAGGAGTTATGTTTGCTTTGCCATATTCATATTTTCTTCATAAAGGGTATATTACCCTGAGATTAGGACTTAGACTCTCTGCTCTTTTTGGCCTGGGTGCTGGCCAGGGTCTTATTGGTTGGTGGATGGTCAAAAGTGGTTTAGAGGAACCACCATCTGAATATTCTCAGCCAAGGGTAAGCCCTTATCGTCTAGCAGCTCATCTTACATCAGCATTTGCTATTTACTGTGGCCTCTTTTGGACTGCCCTTTCTGTTGTTTTGCCTGAACCGCCCACTGAATCCCTGACATGGGTTCGTGGGGCAGCTAAAGTGAGGAGATTGGCATTGCCTATCAGCGTGCTTGTTGGTCTTACTGCTGTCTCTGGTGCATTTGTTGCTGGAAATGATGCTGGGCATGCATTCAATACTTTTCCAAAAATGGGTGATACGTGGATACCGGAAGACATTTTTGTAATGAAGCCTCTGATTCGAAATTTCTTTGAGAATACATCAACTGTACAGCTTGATCACCGTATACTTGCAACTGCAACTCTGGTTTCAGTGGGAATTTTATGGTGGTCAACAAGAAAGCTGGACCTACATCCTGCTATACGATCTGTGATTGGAGGCACTGTTGGCATGGCAGCTCTTCAGGTCACTTTAGGAATTTCAACTCTTCTTTCATATGTACCTGTTTCACTGGGCACTGCTCATCAAGCTGGAGCCTTAACACTTCTGACATTCATGTTACTGCTTAATCACACCGTTCGAAGGCCATCTTTGTCCCTTCTCAAATCTCTGCCTCAAGTTGTCAAAACATACTAA 1377 0.451 MFGRGTVWSVLRRGKEAIGIPKLRGTTTSFSSSTQTPALKFLTPPVATHYIYAFRSQLIPKGHHVRVSYTRNFSKMVAAGAQHKEEGLKLLVSGGPHAQKMIGIWLFGSAAWVFSMVMLGGLTRLTRSGLSMTDWKFTGTLPPLTDEEWLQEFDKYKESPEYKRVNRGMKIEEFKFIYWMEYAHRMWGRALGVMFALPYSYFLHKGYITLRLGLRLSALFGLGAGQGLIGWWMVKSGLEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVLPEPPTESLTWVRGAAKVRRLALPISVLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFVMKPLIRNFFENTSTVQLDHRILATATLVSVGILWWSTRKLDLHPAIRSVIGGTVGMAALQVTLGISTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPSLSLLKSLPQVVKTY* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0104 458 Hamap Heme A synthase [ctaA]. 99 443 IPR023754 GO:0006784|GO:0016020|GO:0016653
Vra6g0104 458 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 40 456 IPR023754 GO:0006784|GO:0016020|GO:0016653
Vra6g0104 458 Pfam Cytochrome oxidase assembly protein 104 433 IPR003780 GO:0006784|GO:0016021|GO:0016653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra6g0104 K02259 - gmx:100784443 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g0104 6 745902 749016 Vra6g0104 6 745902 749016 ECH