Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2871 ATGGATTATCTTCTCTCCACCCTCCTCTTTCTTCTTGCCATGTCTTCCTTCAACCATGTCTCCTCCTTTGCTTCACTGCCACCTTACAAAGACCACTGCGGTTCCATAGTTCCAGAGTCAACTGCCACTGAACTCACCCGCAACTCTTTCCCTTTTGATGATCATCACACAGGTTACTTCACAGGAGGTGATGGCATCATCGATGGTGGAACTTCCTCGTACCAATACTTGATCCTCCAACCATTTAGCATACGTGCCACTGAGTTCTCTGACTTGTTCAAAGTTGAAGCCTCTGTATCACTTGCTACCAGCATAACTTACTACTACCCTGTAGGGAACTTCAGTTATGGTGACAGATTAAGGCATGGGGGTCAGCATCGCTACCGTAGAAGGCATGTAAGATTCAACCTTGAAGGGTTCTGGTCTGAGTCTTCAGGGAAGGTTTGCATGGTAGGGACTGGGAGTGGTTATTCCAAGGAAGGTAAGCATCTTAATCTGCATGTTGTGTTTAAGCTTGATAATGTGTTCAACGTAAGCACTATCACTACCTTAGTTAGTGGAAGTTTGGTGAGCTTGAGTTCTCAAAAGGATGAGAGCTTTGAACCCATTTCTGTGCTGATGTTTCCAAAAAGGAATTACAATTATACCTTGGATTCCACAGAAGTTGCCAATGAATTCTCTTCAGGGACCGATACTGCAAAGGGGGGTTTTTCATTGAATTCATTGAGCTTTTGCTCACGTCCCCTTTCAAGGGAAATTAAAGGGCTTCAATTAGAGTTCTCTTCTGAGTGCACTTCTTCAAAGAACTGCACTCCTTTAAGTGAGAGTTCTGGTCAACTTCCATCTCTAATGTCTTTGAAAGGCATTGAGTGTTCTCTTGATAACAACAAACATAGACTGCGAGTTATGGTGAGGCTTTTGAATTCTAGTGATTATTGGGTTGGCCAAAGTTTCAATCCCAAAAATACGTTGGTAGGGGAGGGATGGTGGGATGAGAAGAAAGGCATGCTGTGTGTAGTGGCTTGTAAAATCATGGCCAAGGCATCATCCTTGGCTGGTTCTCATGTGCGTGATTGCTCAATAAGACTAACACTGAGATTCCCCTCAACTTTGTCAATTAGGAGCACTAGTACCATAGTTGGCCAAATTTGGACCAACAAGAGTACTCACGATACAAGCTATTTCAAGAAGATAGCATTTAACAACGGAGAGGATGCTAGGCTGGGAATTTTTCAAGCTCCAAAGTATGAATATAGCCTACTGGAAAAAGTAAAGAAGTCATGCCCAACACAAAAGCCTATGAAGAACAAGGGGAAAAGATATCCAGATGTCTATTCTTATGACTTGAGATTTGACATGAAAGTTAGTGAGTCCAACAAAAGAGTAGCCTGGGGTAATTCATATCCCTTTGCTATTGGTGATGAGGTCTCTTCCTCGGGTAACAGTTTCTCAAACACCACGGTAGATGTTCCTGAGGTAAAACTCAACAGTACTGGTGGTTTGTTTAATATTAGCTACAAAATCTCACTGTGGTTTAATTCAACCAATGTCTCCAAGTCCCTGCTTAATCAGTCCTCTTTGTCAGTGATGATTTCTGCTGAAGGAGTTTATGATGTTGGAGCGGGAACCTTGTGTATGGTAGGTTGTCGTGGTCTTATCTCAAACTCTCTCATACCAACAGCTCATTCTGTGGACTGTGAGATTGTGGTGAAGTTTCAGCTACCACCGGTGGATGCAAAAAATGGAATCTTCATTAAGGGAAGCATTGAAAGCACACGCAAAAGTTCAGACCCTCTTTACTTCAAAACGTTGGAGTTATCTTCATCTGCCTTCTACATTGAAGCAGCCGAAAAGGTAGTTTGGAGAATGGATATGGAGACCATCATGGTTCTGATATCTACCACTCTAGCGTGTGCTTTTGTGGGATTGCAGATATACCATGTGAAGAAGCACCCCAACGTGCTTCCTTTGCTCTCACTTGTTATGATGGCAATACTTACTCTAGGCCACATGGTACCCCTTGTCGTGAACTTTGAAGCACTTCTTGCTCAAAATCCTAAGAAGAAGAACTTTGTGTTTGGAACTGTTGGTTGGCTTGAAGTGAATGAAATAGCTGTGAGGCTAATCACCATGGTAGCTTTCTTGTTGCAATTCAGACTACTTCAACTAACTTGGTCATCAAGAAAGAGTGATGAAAGCAATAAAGGCCTCTGGCTTGCTGAGAGGAAGGCTTCTTGTGTCACTCTGCCCTTGTATGCTGCTGGCTTATTGATTGCATTGCTGTTGAAGTCTAAGAGAGATGGAGACATTCTTGTGATTACTCCAGTGAACCAGCATCATTCATCTTGGGAGAACTTAAAATCTTATGGTGGTTTGGTGTTGGATGGCTTTCTCTTACCACAGATCATCCTTAATCTGTTCTCTAACATGAGGGAGAATGTTCTTTCATGTTCTTTTTACTTTGGAACTACTTTTGTGAGGCTGTTGCCACATGCCTATGATCTTTACAGGACTCATAATTATGCTCAACTAGATAATGGATCATACATCTATGCAGATCCAAGTGCAGATTTTTACTCCACTTCTTGGGACATTGTCATTCCATTGGGAGGTATTGCTTTTGCTATCATTATCTTCTTGCAGCAACGTTTTGGTGCTCACTGTGTTCTGCCTCAAAAACTCAGAGGGTCTAAGGTTTATGAAAAGGTGCCTGTGTTTGCTGAATCAGAAGCTGAAGTAGAGACCACCAACTTGTAA 2757 0.4236 MDYLLSTLLFLLAMSSFNHVSSFASLPPYKDHCGSIVPESTATELTRNSFPFDDHHTGYFTGGDGIIDGGTSSYQYLILQPFSIRATEFSDLFKVEASVSLATSITYYYPVGNFSYGDRLRHGGQHRYRRRHVRFNLEGFWSESSGKVCMVGTGSGYSKEGKHLNLHVVFKLDNVFNVSTITTLVSGSLVSLSSQKDESFEPISVLMFPKRNYNYTLDSTEVANEFSSGTDTAKGGFSLNSLSFCSRPLSREIKGLQLEFSSECTSSKNCTPLSESSGQLPSLMSLKGIECSLDNNKHRLRVMVRLLNSSDYWVGQSFNPKNTLVGEGWWDEKKGMLCVVACKIMAKASSLAGSHVRDCSIRLTLRFPSTLSIRSTSTIVGQIWTNKSTHDTSYFKKIAFNNGEDARLGIFQAPKYEYSLLEKVKKSCPTQKPMKNKGKRYPDVYSYDLRFDMKVSESNKRVAWGNSYPFAIGDEVSSSGNSFSNTTVDVPEVKLNSTGGLFNISYKISLWFNSTNVSKSLLNQSSLSVMISAEGVYDVGAGTLCMVGCRGLISNSLIPTAHSVDCEIVVKFQLPPVDAKNGIFIKGSIESTRKSSDPLYFKTLELSSSAFYIEAAEKVVWRMDMETIMVLISTTLACAFVGLQIYHVKKHPNVLPLLSLVMMAILTLGHMVPLVVNFEALLAQNPKKKNFVFGTVGWLEVNEIAVRLITMVAFLLQFRLLQLTWSSRKSDESNKGLWLAERKASCVTLPLYAAGLLIALLLKSKRDGDILVITPVNQHHSSWENLKSYGGLVLDGFLLPQIILNLFSNMRENVLSCSFYFGTTFVRLLPHAYDLYRTHNYAQLDNGSYIYADPSADFYSTSWDIVIPLGGIAFAIIIFLQQRFGAHCVLPQKLRGSKVYEKVPVFAESEAEVETTNL* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2871 918 Pfam Protein of unknown function (DUF2921) 30 890 IPR021319 -
Vra5g2871 918 PANTHER DUF2921 FAMILY PROTEIN 1 915 - -
Vra5g2871 918 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 915 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2871 Vra-Chr5 36962731 36965487 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2871 - - vun:114184684 1478.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2871 5 36962731 36965487 Vra5g2871 5 36962731 36965487 ECH