Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2870 ATGGATTCTCTTCTGACCATTCTCTTTTGTGCTTTCACTTTCTTCTCCTTCAACCTTGTCTCCTCCTATGCCTCACAGCCATCTTACAAAGAGCATTGTGCTTCCACAGTTCCTGACTCCACGCCCACCACCAAACTCACCCACAACCCTTTCCCTCTTGCTGATCATCACAACGGTTTCTACAAAGGAGGTGATACCATCATTGATGTTGGTGCTTCTTGGCACCGTTTCTCCTTTCGCCTCTCAAAAAGGAGCACACTTGCAACTCAAACTCCAAACCTTTTCAAACTTCAAGCCACTCTATCATTTAGAAGCGCCAACACATTCAGTGATGGTTCATATTATATGGGTCAACGGCGTTACCGTAAAGGTTACGTAAGCTTCAAGCTTGAAGGGTTTTGGCATGAACCTTCAGGGAAGGTCTGCATGGTGGGGATTAGCAGTGGTTACTCCAGAAAAGGTGACTCTCTCAACGTGAATGCTGTTTTTAAGCTCAATGATGTGTTCAATGTAAGTAATATCACTACCTTGGTCACTGGAAGCTTGGAGAACTTGAGTTCTGAAAAGGGTGATGATAGCTACTTTGAACCCATTTCTGTGTTGATGCTTCCAAATGAAAAATACAATTATACTATGGATTCTGCAGAAGTTGTCAATGAGTTTTCTGATGGGAGTGATGCTGAGCAAGGATTAGCATTGAGTTTAGATTCATTGAGTTTTTGTAAGTATCCCATCTCTTCGGAGCTTAGAAGACTCCAATTAGAGTACTCTCTTGAGTGCCATGCTTCTAAGAATTGCAGTATAAGTGGAGGTTCTGATAAACTTCCATCTCTAATGTCTTTGACGACCATAGGGTGTTCTCTGACTACTAAGAAACATAGATTGAGGGTTCTGGTTGAATTTCAAGATATTAATTATTATGTGATTAACCAGAGTTTTGATCCCAAAACTATGTTAGTAGGGGAAGGATGGTGGGATGAGAAGAACAACACGTTGTGTGTAGTTGCTTGCCATATTATGGGCAAGTCATCATCCTTGGTTGGAACTCATGTGGGTGATTGCTCAGTAAGACTAAGATTGAGATTCCCCTCAATTTTGTCAATAAGAAACACCAGTGGCATAGTGGGCCAAATTTGGAGCAATAAGAGTGGAAGTGATTCAGGATATTTCAAGATGGTAACATTTAGGAATGATGAAGGTCGTGGGGTGGGAGTTCATGGCTTAAAGTATGAGTTTAGCCATCTAGAAACGGTTAACAAATTATGTCCAAGGCCAACACATAAGCCTAATGAGAAGAGGAAGAGATACCCAGAGGCCTATTCTTATAGCATGAGATTTGATATGTCAGTTAAAGAGTCCATGAAAAGAGTAGGTTGGGGTTATTCAGAACCCATAGCTATTGATGATGAAATCTCTGAGTTTTCCCAATATAGATCATCTTCTTTCATAAGTTTCTCAGATGAAGTTCCTGATGAAACCATTGACATCAACAACGGTAGCTTGTTTAACATGAGCTACATGATCAGCCTCTCCGTTTCAAAGTCAGTTAACAAGAATTCTGTGTTTAATTTGTCCTCTGAGAGAGTGAAGATCATTGCAGAAGGAGTTTATGATGCTGGAGCAGGAACCTTGTGTATGGTAGGTTGCCGTGAATTGAACCCAATCTCAAAAAATGAGACACCAGTGGCTCATTCTACGGACTGTGACATTCTTCTGAAGATTCAGTTTCCACCATTGGACTCAAGTGATAGAAGCTACATTAAGGGAAGTATTGAAAGCAGGCGCAAAGAATCTGATCCTCTATACTTCAAGCGTTTAGACATATCAGCAGTTCCATACATAGCAGCAAGAAGAAAAATTTGGAGAATGGATATGGAAGTGATCATGGCTCTGATATCTAAAACTCTTGCATGTGTTTTTGTGGGGTTGCAACTCTACAAGGTGAAGAGAGAACCAAATGTGCTCCCCTTCATCTCACTTATTATGATCTCAATTCTTACTTTGGGTCACATGGTACCTCTTGTTCTGAATTTTGAAGCTCTTCTTACTCAAAATCCCAACAACAGAAGGCCAATATTTAGAAACAATCCATGGCTAGAAGTTAATGAAATAAGTGTGAGGCTGGTCACCATGGTGGCTTTCTTGTTGCAATTCAGGCTCCTGTATCTCACCTGGTCAGCAAGAAAGAGTGGTGAAAGCAAGAACAGGCAATGGATTGCTGAGAGGAACACTGGTATTGTTACTTTACTCTTGTATGCAGCAGGGTTACTCGTTGCATTCATGTTGAAGTTGAAGAAGAATGGAGACAAGGATTCTGTATATATTCCAATGTACAACCAACCTTCATCTTGGGAGAACATAAAATCTTATGGTGGTTTGGTTTTGGATGGTTTTCTCTTGCCACAAATCATTCTTAACCTGTTTTCAAATATGAGGGGCAATGTTCTTTCAAGCTCTTTTTACTTTGGAACTACTTTTGTGAGATTGCTGCCCCATGCCTATGATCTTTACAGGACTCATACTGATGATCATCTTGATAATGGGTCATACTACTATGCTGATCCAAGTGAAGACTTTTACTCAACAGCTTGGGATATTGTCATTCCATTGGGAGGTTTTTTCTTTGCTGTTGTTATCTACTTGCAGCAACGTTTTGGTGCTCATTATATTTTTCCCCAGAGATTCAAAAGGGTATATCAGAAGGTTCCTGTTGTTACTGATTCAGAAGCAGATGTAGAGACAATCAACAAGTAA 2754 0.4038 MDSLLTILFCAFTFFSFNLVSSYASQPSYKEHCASTVPDSTPTTKLTHNPFPLADHHNGFYKGGDTIIDVGASWHRFSFRLSKRSTLATQTPNLFKLQATLSFRSANTFSDGSYYMGQRRYRKGYVSFKLEGFWHEPSGKVCMVGISSGYSRKGDSLNVNAVFKLNDVFNVSNITTLVTGSLENLSSEKGDDSYFEPISVLMLPNEKYNYTMDSAEVVNEFSDGSDAEQGLALSLDSLSFCKYPISSELRRLQLEYSLECHASKNCSISGGSDKLPSLMSLTTIGCSLTTKKHRLRVLVEFQDINYYVINQSFDPKTMLVGEGWWDEKNNTLCVVACHIMGKSSSLVGTHVGDCSVRLRLRFPSILSIRNTSGIVGQIWSNKSGSDSGYFKMVTFRNDEGRGVGVHGLKYEFSHLETVNKLCPRPTHKPNEKRKRYPEAYSYSMRFDMSVKESMKRVGWGYSEPIAIDDEISEFSQYRSSSFISFSDEVPDETIDINNGSLFNMSYMISLSVSKSVNKNSVFNLSSERVKIIAEGVYDAGAGTLCMVGCRELNPISKNETPVAHSTDCDILLKIQFPPLDSSDRSYIKGSIESRRKESDPLYFKRLDISAVPYIAARRKIWRMDMEVIMALISKTLACVFVGLQLYKVKREPNVLPFISLIMISILTLGHMVPLVLNFEALLTQNPNNRRPIFRNNPWLEVNEISVRLVTMVAFLLQFRLLYLTWSARKSGESKNRQWIAERNTGIVTLLLYAAGLLVAFMLKLKKNGDKDSVYIPMYNQPSSWENIKSYGGLVLDGFLLPQIILNLFSNMRGNVLSSSFYFGTTFVRLLPHAYDLYRTHTDDHLDNGSYYYADPSEDFYSTAWDIVIPLGGFFFAVVIYLQQRFGAHYIFPQRFKRVYQKVPVVTDSEADVETINK* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2870 917 Pfam Protein of unknown function (DUF2921) 30 890 IPR021319 -
Vra5g2870 917 PANTHER DUF2921 FAMILY PROTEIN 1 914 - -
Vra5g2870 917 PANTHER FAMILY PROTEIN, PUTATIVE (DUF2921)-RELATED 1 914 IPR021319 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2870 Vra-Chr5 36957818 36960571 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2870 - - gmx:102660202 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2870 5 36957818 36960571 Vra5g2870 5 36957818 36960571 ECH