Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2843 ATGGGTAGATTCTTTGTGATGGAGCTTGAGGGAAGGTCTTATAGATGCAAGTTTTGTAGTACTCACTTGGCCCTTGCAGATGATCTCATTTCAAGGTCGTTTCATTGCCGGAGGGGAAAAGCATACCTATTCAATAACGTTGTCAACTTCACACTCGGAGCACCAGAAGAAAGGATGATGCTTTCAGGATTACATACTGTGGCAGATATCTTTTGCTGTTGTTGTGGTCAAATAATTGGCTGGAAATACGAATTTGCACACGAGAAGAGTCAAAAGTATAAAGAAGGGAAGTTTGTTCTTGAAAGAGGAAGGATAGTTGATGAAGTTGAGTTCTCTACTGAATTCTACATCGATAGTCGTGTCTGTGTGAGTGATGGTGACGAGGCTTAA 390 0.4128 MGRFFVMELEGRSYRCKFCSTHLALADDLISRSFHCRRGKAYLFNNVVNFTLGAPEERMMLSGLHTVADIFCCCCGQIIGWKYEFAHEKSQKYKEGKFVLERGRIVDEVEFSTEFYIDSRVCVSDGDEA* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2843 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
Vra5g2843 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Vra5g2843 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Vra5g2843 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 14 105 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2843 Vra-Chr5 36373442 36382031 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2843 - - gmx:100813120 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2843 5 36373442 36382031 Vra5g2843 5 36373442 36382031 ECH