Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2830 ATGGAAATTGATCTGTCAGAAGCAGAACCTGAGATCATTAATGACGGTTTCACGGCCAAGAAATCAAAGCAGCGTAAGAGGAAGAGTTTCATGGTGGAAGAGGAAGGGCAAATGGGGTCGCGAGAGAAGCTGGCAAAAAAAATCTTGTTGTCTCTTACTCGGCCTTCCTACGTCTTGGGATTGGGTCCCAAACCTCTGAGGAAGGAACACCGTATGAGGTTGCGCTATCTGCTGCGCAGACTCGTCAACCAGCATCAGTGGGTCGAAGCCAGTGGTGTTCTCAGTGTCTATATGAAGGGCACACTTAATGAGACCTCGCCCCTCAGAAATCGTCTTAAATTTTGGGTTTTAATGGAGCTTCTTAATCGTGTGAAAAATAATTCTACTAATCCCACAAGAATCAAGAACCTCTATGATATTTGGTCGAAAAAAATTGGATCAATGAAGACTTGGCCTTTACAGAGCAGATACGCAGTCCACTTTGAGTTCATCTTTTTCTGTCTTATGCAAGGCAATGCAGGGGATGCATACCAACTTGCTTTATGTATTGAACAAAACAAAGTTGATATTGATCCTGTATTAAAGATGATGATGGGTTTGACATTCTATGAGCTGTGGTATTCTTCAATCCCCAAAGAATTCCAGTGGAGAAACTCAGATCAGTTTGACTTGCAAGAGAACTCACCTATGGAGATCTCATTTACCAATAAAACTGGACAGTCAGAGTGGTACAATTCAGTTGAATCACACATGGCTGAGTCCCCTTGTCAACGCCATTCAGATGCCTCTATCATGAATGATAAACATATATCTAGGGATATTGTATTCAGTGAAGACATAGAGGTTGGTACGCATAAAAGAGAAAAAACACATCAGAACTTTCAACCAGAAGGTTTTTACTTAAGTTCTGAAGAGCAAAACGGATTTGGAGACCCTTTTTCTAACAATGGAGGTCTTACGCAAGATATCTTACACGGCCTTGGAGGACTTGATTTGTGGTTGCTGCCCTTGCATTTTTCTGATGAGAGCAATTTGGAGGAGTTCATGTATTCGCAAATAGATCAGCCTAATGACTATTACAAAAATTCAGTGAAATATTTGCAACTAGCTCTCAATTCAGAACCTTCTGCTTCGGCAGCATTACTTCCATTGGTACAGCTGTTGCTAATTGGAGGACAAGTTGACGAGGCTCTAAATATGCTTGAGAAGCAGTGCTGTAATGCAGCCTCTGTATTGCCATTAAGAGTGAGGGCTGCTCTCTTGGAGCGTTTTGATCGAAACAACTCTGGCATGCTTATCTGTTTTGAGAATATATTGAAGAAGGATCCAACATGTAGTGATGCCTTAGCCAAACTTATCAAGATGCACCAAAATGGAGAGTATAGTCTTGAGTCTATGCTGGAAATGATTGCTTTACATTTAGATGCTACAGATTCAGAACACAATACGTGGAAGGTGTTATCTTCATGTTTCTTAACACTGTATTCCTACGAAGAAGACTGTATGTCTTCATGCCCCATGCAAACTAAAAATGGACACAAGCAACTTGGTTCCTTTGACAAAACCCCTAAAATATTTACGGATGGTACATCAGGAAAATCTTGGTATCTTCGCTGTAGGTGGTGGATAACAAGACATTTCAGCAATAGCAAGCTAGAATCAGAGATTGAATCAGGTGATTTGCAGTTACTCACATGCAAAGCAGCATGTGCATCGTATATGTATGGACGCGAGTTCAGCTATGTTGAGAAGGCTTATTCTCATTTAGAGAAAGAAAATGATAAAGAGTTGTTGTCTTTCTTGGATAAGCACAGGAGAAATTCATTAGGAATTTATAAAAAATTTCGAAAGAAATTAAACATATAA 1866 0.4014 MEIDLSEAEPEIINDGFTAKKSKQRKRKSFMVEEEGQMGSREKLAKKILLSLTRPSYVLGLGPKPLRKEHRMRLRYLLRRLVNQHQWVEASGVLSVYMKGTLNETSPLRNRLKFWVLMELLNRVKNNSTNPTRIKNLYDIWSKKIGSMKTWPLQSRYAVHFEFIFFCLMQGNAGDAYQLALCIEQNKVDIDPVLKMMMGLTFYELWYSSIPKEFQWRNSDQFDLQENSPMEISFTNKTGQSEWYNSVESHMAESPCQRHSDASIMNDKHISRDIVFSEDIEVGTHKREKTHQNFQPEGFYLSSEEQNGFGDPFSNNGGLTQDILHGLGGLDLWLLPLHFSDESNLEEFMYSQIDQPNDYYKNSVKYLQLALNSEPSASAALLPLVQLLLIGGQVDEALNMLEKQCCNAASVLPLRVRAALLERFDRNNSGMLICFENILKKDPTCSDALAKLIKMHQNGEYSLESMLEMIALHLDATDSEHNTWKVLSSCFLTLYSYEEDCMSSCPMQTKNGHKQLGSFDKTPKIFTDGTSGKSWYLRCRWWITRHFSNSKLESEIESGDLQLLTCKAACASYMYGREFSYVEKAYSHLEKENDKELLSFLDKHRRNSLGIYKKFRKKLNI* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2830 621 Pfam TAF RNA Polymerase I subunit A 81 587 IPR039495 GO:0000120|GO:0006360
Vra5g2830 621 PANTHER TAF RNA POLYMERASE I SUBUNIT A 20 618 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2830 - - var:108333857 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2830 5 36168555 36178972 Vra5g2830 5 36168555 36178972 ECH