Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2815 ATGGCCACTTCTCACAAGGTCTTGCTTCCAATCGCAGAGGGCACCGAGCCCATGGAGGCTGTCATAATCGCCGACGTCCTCCGCCGCGCAGGCGCCGACGTCACAGTCGCTTCCGCCTCCGCCAGCCTTTCCGTCCTGGCTCGCCACGATGTCAAGATCGTCGCAGACGCCCTCGTCTCGGACGTCGTCGGCACCTCGTTTGACCTCGTCGCACTCCCTGGAGGGATACCGGGTGTTGAAAATCTGAGGGACTGTAAGGTTTTGGAAGGGTTGGTGAAGAAGCATGTGGAGGAAGGACAGCTTTATGCTGCCGTGTGTGCTGCTCCTGCGGTAGTGCTTGGGCCTTGGGGTTTGCTGAATGGATTGAAGGCGACTTGTTTTCCTACATTGATGGAGAAATTGGCCTCTTACGCAGCCACTACTGTCGAGTCTAGGGTGCAGGTGGATGGGAAATTAGTGACCAGTCGAGCGCCGGGAACTACCATGGAGTTTGCTGTTGCGCTGGTTGAGCAGTTAATGGGAAAAGTCAAAGCAGAAGAAGTTGCTGGCCCTCTGGTCATGCGTTCCAATCATGACGACGAACATACTTTCAAGGAGTTTAACCCAGTGCAGTGGACATTTGACAATCCACCCAGGATTCTTGTACCAATTGCTAATGGTTCTGAGGAAATGGAAGCTGTGATCATCATTGATATTTTGCGAAGAGCAAAGGCAAATGTTGTGGTTGCTTCTGTTGAGGATTATCTAGAGATTGTGGCATCACGCAATGTTAAACTGGTGGCAGACATGCTCCTTGACGAAGCAGCCAAACTTTCATATGACCTTATTGTCTTACCTGGTGGACTTGGTGGTGCCCAAGCATTTGGGAACTCAGAAACCTTGGTGAAATTGCTGGAAAAACAAAGAGAATCAAACAAATACTATGGAGCAATTTGTGCATCGCCCGCCTTAGTCTTGGAGCGCCATGGTTTGCTCAAGGGTAAAAAGGCCACTGCCTATCCTGCAATGTGCGACAGGTTATCTGATCAGAGTGAAGTAGAAAACAGAGTGGTAGTTGATGGGAATCTCATTACCAGTAGAGGCCCAGGAACCTCCATTGAGTTTGCATTAGCTATTGTGGAGAAGCTGTTTGGACGCCAGTTATCTTTAGAACTTGCAAAGGCACTAGTGTTCGCGCGCCCTTAA 1185 0.5038 MATSHKVLLPIAEGTEPMEAVIIADVLRRAGADVTVASASASLSVLARHDVKIVADALVSDVVGTSFDLVALPGGIPGVENLRDCKVLEGLVKKHVEEGQLYAAVCAAPAVVLGPWGLLNGLKATCFPTLMEKLASYAATTVESRVQVDGKLVTSRAPGTTMEFAVALVEQLMGKVKAEEVAGPLVMRSNHDDEHTFKEFNPVQWTFDNPPRILVPIANGSEEMEAVIIIDILRRAKANVVVASVEDYLEIVASRNVKLVADMLLDEAAKLSYDLIVLPGGLGGAQAFGNSETLVKLLEKQRESNKYYGAICASPALVLERHGLLKGKKATAYPAMCDRLSDQSEVENRVVVDGNLITSRGPGTSIEFALAIVEKLFGRQLSLELAKALVFARP* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2815 394 PANTHER BNAA06G01020D PROTEIN 4 389 - -
Vra5g2815 394 Pfam DJ-1/PfpI family 212 374 IPR002818 -
Vra5g2815 394 Pfam DJ-1/PfpI family 5 171 IPR002818 -
Vra5g2815 394 CDD GATase1_DJ-1 213 376 - -
Vra5g2815 394 CDD GATase1_DJ-1 7 172 - -
Vra5g2815 394 SUPERFAMILY Class I glutamine amidotransferase-like 210 392 IPR029062 -
Vra5g2815 394 SUPERFAMILY Class I glutamine amidotransferase-like 5 192 IPR029062 -
Vra5g2815 394 Gene3D - 1 200 IPR029062 -
Vra5g2815 394 Gene3D - 207 393 IPR029062 -
Vra5g2815 394 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 4 389 - -
Vra5g2815 394 TIGRFAM not_thiJ: DJ-1 family protein 212 387 IPR006287 -
Vra5g2815 394 TIGRFAM not_thiJ: DJ-1 family protein 6 183 IPR006287 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2815 Vra-Chr5 35766135 35771892 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2815 K03152 - gmx:100803116 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2815 5 35766135 35771892 Vra5g2815 5 35766135 35771892 ECH