Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2807 ATGGCCCTCTCCGCCGTGAGGCAGCGACGTTCCGAGGCGTCTGATCCGTCTCCGTCGCAACCGTACACGAAGCTGGACAAGCCTCAGCAATCGGAGGAAAAAGATGGAAAAGGGTTGGGGTGGCTTTTTCCGTTCTTGGCTCTTGGATTTTTGAGGTACATGAGTGCCACTTCCAACATCATCCACGATTGCGACGAAGTCTTCAATTACTGGGAGCCCCTTCATTACCTTCTCTACAAAACTGGCTTCCAGACATGGGAATATAGTTCACAGTATGCTCTTCGGTCGTATTTGTACCTTTTATTTCATGAAATAGTGGGTCGACCAGCTTCATGGTTGTTTAGTGAAGACAAAGTGAGAGTGTTTTATGCTGTGAGATTCTTTCTTGGTCTTCTCTCTGTTTTAGCTGACACTGTTCTCGTGGTAGCACTTTCGAGAAAGTATGGAAAACGACTTGCTACTTATGCACTTGCTATGCTGTGCCTAACTAGTGGCTGTTTCTTTGCTAGCACTAGTTTCTTGCCGAGTTCATTTTCTATGTATGCAATATCTCTCGCCTCAGGTTTATTTCTTCTGGATAAGCCGGCATCGGCAATTTCTGTTGCTGTTATTGGTGTCATACTTGGCTGGCCATTCTCAATCTTGGCTTTCCTTCCAGTGACATTATATTCTCTGTCTAGAAAATTTAAAGTGTCATTTATTGCTGCGGCGATCACATCGGTTGTTTTTCTTGCATTGTCAATAGTTACGGACTTTTACTACTATGGAAAATGGACTTCATCTGTGTTGAATCTTTTAATATACAACGTAGCTGGAGGTGGTGAAAGCCATTTGTACGGGATTGAAGGGCCTCTTTATTATCTGAGGAATGGATTTAACAATTTCAACTTTTGTTTTGTTCTTGCTCTGCTGTTCTTGGGGATTTTTCCTATTGCAAAAAAGAAATATGCACCAGACCTACTGATTGTGATATCTCCTATATATATTTGGCTGGGTTTTATGTCTTTGCAGCCACACAAAGAAGAAAGGTTCCTTTATCCAATATATCCACTTATTTGTGTTGCTGCTTCAGCTGTTATTGAGAGCTTCCCAGATCTTTTTCGTAGCAAATATGATACATACCAACGTTCTATAATAGTGACAGTTGCCAAAGTTATGAGACCAGTGGCTCTTAGCCTTATACTATATGCCTCTCATGCCCGTACATTTTCTTTGATTCACGGTTACTCAGCCCCATTGGAGGTTTACAAGATTTTGGAGCACTATGATGCAGAAAACAATTCTGTACTTTGTGTTGGAAGCGAATGGCATCGCTTTCCATCATCATTTTTCATCCCAGATTACGTGGGACAAGTTCGATGGATCGATGATGGTTTCCGAGGTCTTCTTCCCTTCCCATTTAATTCTACCCTAGGGGGGACTGCTGCAGCACCACCATATTTTAACAACAAAAACATGGCATCAAGCGAGCAATTTCTCCTTGATGTAGATGCTTGTACTTTCCTTGTTGAGCTGCAGCTCAATAGGCCCTACCTCACTCGTGGAAGTGACTTGTCAACTTGGGAGCCTATTGCTGCATTGCCTTATTTGGACAGAGAGCTTTCACCGGCTTTGTATAGGTCTTTCTTCATTCCATACCTTTGGCAAGATAAGAATGTTTTTGGCACTTATAAACTGTTCAAAAGAGTAACCACATAA 1698 0.4223 MALSAVRQRRSEASDPSPSQPYTKLDKPQQSEEKDGKGLGWLFPFLALGFLRYMSATSNIIHDCDEVFNYWEPLHYLLYKTGFQTWEYSSQYALRSYLYLLFHEIVGRPASWLFSEDKVRVFYAVRFFLGLLSVLADTVLVVALSRKYGKRLATYALAMLCLTSGCFFASTSFLPSSFSMYAISLASGLFLLDKPASAISVAVIGVILGWPFSILAFLPVTLYSLSRKFKVSFIAAAITSVVFLALSIVTDFYYYGKWTSSVLNLLIYNVAGGGESHLYGIEGPLYYLRNGFNNFNFCFVLALLFLGIFPIAKKKYAPDLLIVISPIYIWLGFMSLQPHKEERFLYPIYPLICVAASAVIESFPDLFRSKYDTYQRSIIVTVAKVMRPVALSLILYASHARTFSLIHGYSAPLEVYKILEHYDAENNSVLCVGSEWHRFPSSFFIPDYVGQVRWIDDGFRGLLPFPFNSTLGGTAAAPPYFNNKNMASSEQFLLDVDACTFLVELQLNRPYLTRGSDLSTWEPIAALPYLDRELSPALYRSFFIPYLWQDKNVFGTYKLFKRVTT* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2807 565 MobiDBLite consensus disorder prediction 1 35 - -
Vra5g2807 565 PANTHER GLYCOSYLTRANSFERASE 45 562 IPR005599 GO:0016757
Vra5g2807 565 MobiDBLite consensus disorder prediction 10 26 - -
Vra5g2807 565 PANTHER ALPHA-1,2-MANNOSYLTRANSFERASE ALG9 45 562 IPR039484 GO:0000030
Vra5g2807 565 Pfam Alg9-like mannosyltransferase family 45 446 IPR005599 GO:0016757
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2807 1 563 Glycosyltransferase AT1G16900 71.880 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2807 K03846 - gmx:100805971 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2807 5 35603853 35610916 Vra5g2807 5 35603853 35610916 ECH