Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2803 ATGGCTTCTGTGCCTCAATCCAAAACTTCCCTTGTTATCATCTTCTTCTTCTCGTCCTTCACCATCATTCACGCCATTGTTCCTCAAAATGAGACCTTCAAATTCGAAAACTCAGGTGAGTTTGGACCCTACATTACCGAGTACGATGCTAGTTACCGAATGCTAAGCCTTTTCAGTTCTCCTTTCCAACTAGCATTCTACAACACCACCCCAAATGCCTTCACTCTAGCCCTGCGCATGGGCCTTAGACGCTCAGAGCAACTTTTTCGCTGGGTGTGGGAGGCCAACAGAGGCAACCCAGTTGGAGAGAACGCCACTTTTTCACTTGGAACTGATGGAAACCTGGTGTTGGCCGAAGCTGATGGTAGAATTGCTTGGCAAACCAACACTGCCAACAAGGGTGTTATGGCCTTCAAGTTACTTCCAAACGGTAACATGGTCCTCCTTGACGCACAAGGAAGGTTTGTCTGGCAAAGTTTCGACCACCCCACTGATACCCTTTTGATTGATCAGTATCTTAGAGCAAAAGGGCCATCCAAGTTGGTGAGTAGGCTTTCAGAGAGGGACAATCTAAACGGTCCTTATAGTTTGATTTTGGAACCTAAAAGGTTGGCCTTGTACTACAAGAGCAAGAATTCTCCTAGACCTGTTCTTTATTGGTACAGGCTCTTCACTCAACAAGGTTCAGTAGAAAATATCACTCTCACATCTTATCCAGACACCTTTGAAATTGAATTCACCTATGCACTCAGTTCTTCCACCAGTGACTACAGAACCATGGCAGAACCATTGAACAACATTCCCGTTGGAGTGATGGGAATGCCAGTGAACAACAGCACCTTGACATACCTTAGGCTTGGAATTGATGGCAACATTAGGCTGCACACTTACTTCGTCCATGTGCGTTCTGGTGTTTGGGAAGTGACCTACACTCTCTTTGACAGAGATTCTCACGATGAGAGTGAGTGCCAAAGGCCTGAGAAGTGCGGGAATCTTGGACTTTGTCAGAACGATCAATGTGTGGGTTGTCCATTAGAAAATGGAGTGTTTGGATGGAGCAAGAACTGCAGTGGCAAGGCTGTGACATCATGCAAGGGAAGTGATTTTCACTACTACAAAGTTGAAGGAGTTAGACATTACATGAGCAAATACAGTGAAGGAGATAAAGTGAGTGAAAGTAGTTGTGGAAAGAAATGCACTAAGGATTGCAAGTGTGTTGGGTATTTCTACCACAGGGAGAACGCTAGGTGTTGGATAGCTTATGATCTACAAACCCTTACAAGAGTCGCCAATACCAAACAAGTCGGATATATTAAGGTGCCTAATTAG 1329 0.4492 MASVPQSKTSLVIIFFFSSFTIIHAIVPQNETFKFENSGEFGPYITEYDASYRMLSLFSSPFQLAFYNTTPNAFTLALRMGLRRSEQLFRWVWEANRGNPVGENATFSLGTDGNLVLAEADGRIAWQTNTANKGVMAFKLLPNGNMVLLDAQGRFVWQSFDHPTDTLLIDQYLRAKGPSKLVSRLSERDNLNGPYSLILEPKRLALYYKSKNSPRPVLYWYRLFTQQGSVENITLTSYPDTFEIEFTYALSSSTSDYRTMAEPLNNIPVGVMGMPVNNSTLTYLRLGIDGNIRLHTYFVHVRSGVWEVTYTLFDRDSHDESECQRPEKCGNLGLCQNDQCVGCPLENGVFGWSKNCSGKAVTSCKGSDFHYYKVEGVRHYMSKYSEGDKVSESSCGKKCTKDCKCVGYFYHRENARCWIAYDLQTLTRVANTKQVGYIKVPN* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2803 442 ProSiteProfiles PAN/Apple domain profile. 364 442 IPR003609 -
Vra5g2803 442 SMART blect_4 46 163 IPR001480 -
Vra5g2803 442 CDD PAN_AP_plant 363 441 - -
Vra5g2803 442 ProSiteProfiles Bulb-type lectin domain profile. 42 161 IPR001480 -
Vra5g2803 442 CDD B_lectin 46 163 IPR001480 -
Vra5g2803 442 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 210 IPR036426 -
Vra5g2803 442 Pfam D-mannose binding lectin 92 175 IPR001480 -
Vra5g2803 442 PANTHER - 11 442 - -
Vra5g2803 442 PIRSF SLG 1 442 IPR035446 -
Vra5g2803 442 Gene3D - 45 161 IPR036426 -
Vra5g2803 442 PANTHER CURCULIN-LIKE (MANNOSE-BINDING) LECTIN FAMILY PROTEIN-RELATED 11 442 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2803 - - var:108333417 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2803 5 35490193 35491700 Vra5g2803 5 35490193 35491700 ECH