Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2562 ATGGAAGCGGAAGAAGAAGAAGACGCGCCACCAAACTTCTGGACGGAGAACGGTAGCCACCGCCGCCTCCGACGATCTTACTCGCTGTTTCTCAGCTCCAGTGCGGTTCTGATATGCGTTCTGGTGATTGCACTTGCATTCACGTTGGTCATAATTCCCACAATCTTTTCCACGTTGCACGCATTCCCCTACCATCTTTTCAAACCCAATTCCGTCAAGAAGAGTTGGGACTCCCTCAACTTTGTGCTTATCCTCTTCGCCATTATCTGCGCCTTCCTCAGCAGGAACAACGCCGACGAGAGTTTCTCCGACACTCCACACCAGTACGAGAAACCAAACCCTACAACAACGCCACGGTGGTACGAGGAAACAGATCGCACGTCCTACAAATCGTATAACAGGCTCAGGAGTTTCAACTCCTACCCGGATCTCCGCCAAGAGTCGCCGTGGCTAACCTCCGACGAACGTTGGCGATTTTATGATGATACACACGTTAACGGTTATTCTAGATTTGACTTGGAAGAAGAGAGCGCGGAGAACGTAGAAGTAGATAAAGAGGTTCCGCTGCTACCGGCGTCTCCACCACCAGTTCTGGCGGAGGAGAGGAGTGGGGAAAGTAAGAATAAGGGAACAAGTGCAACAACTAAAGAGTTGTTGACTTCTTCGAAGGGAAAGAAGAAGAAGAAGAAACAAAGACAAGGAAGCTTTGAAAATCTTAATCGCATTCGAAATTCTGAACCTCATTCACATCCTCGAGTTTCCTCAGTTTTTCATAGTCTGTTTCCTTCGAAGAAAAGCAAGAGGAAGAAACTTGAGTCTGCTTCATCGTCGCATGTTTCATCATCCAAAACCGAACCAGTTAGTGGGAGTGTGGCCAGTTCCCTTAAATCAAACAAGAAAGAGACTTTCTTGAAGGAAAACGTGGCTGTTACTGGTAAGGAGTCACCTTTGATCCCTATACCTCCACCTCCGCCGCCGCCGTTCAATATGCCGGCGTGGAAGTTCCGGGTGCAGGGTGACTTTGTTAGAATAAACAGCCTTAGTAGCTCGAGTAGTGGTTCCCCAGAGTTAGAAGATGAAGTTGTGGAGTCAGCAAGAAGTGAAGATGGTGGAGAACCTGCAATCTTATTGTTCTATGATCCTAGCCCTGATGATGTTGACACCAAAGCTGATACTTTTATTGAAAGGTTCAGAGCTGGTTTGAAAGCTGGACCCAGTTGA 1221 0.4767 MEAEEEEDAPPNFWTENGSHRRLRRSYSLFLSSSAVLICVLVIALAFTLVIIPTIFSTLHAFPYHLFKPNSVKKSWDSLNFVLILFAIICAFLSRNNADESFSDTPHQYEKPNPTTTPRWYEETDRTSYKSYNRLRSFNSYPDLRQESPWLTSDERWRFYDDTHVNGYSRFDLEEESAENVEVDKEVPLLPASPPPVLAEERSGESKNKGTSATTKELLTSSKGKKKKKKQRQGSFENLNRIRNSEPHSHPRVSSVFHSLFPSKKSKRKKLESASSSHVSSSKTEPVSGSVASSLKSNKKETFLKENVAVTGKESPLIPIPPPPPPPFNMPAWKFRVQGDFVRINSLSSSSSGSPELEDEVVESARSEDGGEPAILLFYDPSPDDVDTKADTFIERFRAGLKAGPS* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2562 406 MobiDBLite consensus disorder prediction 177 298 - -
Vra5g2562 406 MobiDBLite consensus disorder prediction 312 331 - -
Vra5g2562 406 PANTHER COTTON FIBER (DUF761) 1 175 - -
Vra5g2562 406 PANTHER COTTON FIBER (DUF761) 187 402 - -
Vra5g2562 406 MobiDBLite consensus disorder prediction 346 373 - -
Vra5g2562 406 MobiDBLite consensus disorder prediction 275 298 - -
Vra5g2562 406 MobiDBLite consensus disorder prediction 316 331 - -
Vra5g2562 406 PANTHER OS01G0584100 PROTEIN 187 402 - -
Vra5g2562 406 PANTHER OS01G0584100 PROTEIN 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2562 Vra-Chr5 32395419 32396983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2562 - - ccaj:109806555 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2562 5 32395419 32396983 Vra9g0291 9 2247378 2249908 PCT