Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2552 ATGATGATGGAGTTCAGATCGAAGTCATGCAGAGATGAAAAGGTTGAGAGTGAAAGCAACAATGGAGGCAAGGTGGCCCCAAGAAGCATGAAGGATCTGAGGTGTCAGAGTGCGAATAATGGCTGTTCTGGTCATGGAAAGCAGATAGGTAGCAGTGCTAAAGAGATGAAGGTGAAGAAAGTGAAAAGGGCAGCTTCTAAACCATCAAAAAGTTGGAGCTTTAATGATCCTGAGTTGCAGAGGAAGAAGAGAGTCGCTGGCTATAAAATATATGCAGCAGAAGGCAAAATGAAAGGCTCTCTCAGAAAGAGTTTCAGGTGGATCAAGCACACTTACACTCAAGTTCTCTATGGATGGTGGTGA 363 0.4408 MMMEFRSKSCRDEKVESESNNGGKVAPRSMKDLRCQSANNGCSGHGKQIGSSAKEMKVKKVKRAASKPSKSWSFNDPELQRKKRVAGYKIYAAEGKMKGSLRKSFRWIKHTYTQVLYGWW* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2552 120 MobiDBLite consensus disorder prediction 1 19 - -
Vra5g2552 120 MobiDBLite consensus disorder prediction 1 30 - -
Vra5g2552 120 Pfam Domain of unknown function (DUF3511) 74 118 IPR021899 -
Vra5g2552 120 PANTHER OS06G0564000 PROTEIN 3 119 - -
Vra5g2552 120 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED 3 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2552 Vra-Chr5 32310828 32311627 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2552 - - gmx:100305940 182.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2552 5 32310828 32311627 Vra9g0276 9 2063429 2063788 PCT