Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2546 ATGGGAATATTTGCGGTAAACAAGGAAGGAGAAGTCACAGTGAGCTTCAAGAACGACATAAATTTGAATGATTTCTTTAAGCCTGATCAGATAGCGGATGCAACTGCTGAAAAATCTACAAGTTTGAAGAGAAGGAAGGTTGGAAATCTGAAGCTCCAAACCGCATTCTCGTTCAAATATAGGCTTTCACTAGAGGGTTTGTTCAGCAAACAAAAACCAGAACAAATGTTTTCTCCAGAGCCCTATTCTCAGCTTGAGTTAGCAGCAATTAAGCTTCAGAAAGTCTACAAGAGTTACAGGATCAGAAGAATTCTGGCTGATTGTGCAGTTGTTTGCGAGGAGCTGTGGTGGAAGGATTCGGTGATTACTGCTTGCAGGTGTTCTACATCCCATTTTGACCCTGATAAATCACAAACACCTATTTCAAAATGGGCAAGGGCTAGGATGATGGCTGCTAAGGTGGGAAAAGGTTTGTCCAAAGATGATAAGGCACAGAAATTCGCACTAAGACACTGGCTTGAAGCTATTGATCCTCGTCATCGTTATGGTCATAATCTTAATTTCTACTATGAAGTCTGGTTTCGTAGCCAGAGCTATCAGCCTTTTTTCTACTGGTTGGATGTTGGGGATGGCAAAGAAGTGGAGCTAAAAGCATGTCCTAGAAAGGACTTGCAGGACCAGTGCATAAAGTACCTTGGACCTAAAGAAAGGGAAGCATATGAAGTGATTGTAGAGGGAGGGAGGCTTGTTTATAAAGAGAGCAAGAACCTTGTACACACTACCGAGGAATCCAAGTGGATTTTTGTTCTTAGCTTATCTAGAGTTTTGTATGTTGGACGAAAGAATAAAGGCCATTTTCAACACTCTAGTTTTCTGGCTGGTGGTGCAACCATTGCATCTGGAAGATTGGTTGCTCAGCATGGAGTTCTTCAAGCTATATGGCCATACAGTGGTCACTACCGTCCAACAGAGAAAAATTTCAAGGAATTCATTAGCTTCTTGGAGGAACACAGTGTGAATATGACAAATGTAAAGAAAGATGCAGTGGACGAAGATGTTCCACCTTCTCAACCTGCCAATGATGAGAAGCTGGCCTTTGAATACATGGATGGCAATGCTAATAAAAATGGTAAAGAAAAAGCGGAAGAAGGTTCAGTACATGAGAACAAGCCAATGTCAAGCAAATGGAGTACTGGAGTAGGTCCTCGGATTGGTTGTGTGAGAGAATATCCAACAAAATTCCAAGTTCAAGCACTTGAACAGCTCAATCTTTCACCTAGAGACAACCAGGGAACATTTGCAGACAAAGCACCAATTCCTTCTCCCAGACCAAGAACCAAACATCTTTCACCTAAGCTTGTGAACATGGGACTTCCTAGCCCTATGCTACAAGGACATTGA 1401 0.4204 MGIFAVNKEGEVTVSFKNDINLNDFFKPDQIADATAEKSTSLKRRKVGNLKLQTAFSFKYRLSLEGLFSKQKPEQMFSPEPYSQLELAAIKLQKVYKSYRIRRILADCAVVCEELWWKDSVITACRCSTSHFDPDKSQTPISKWARARMMAAKVGKGLSKDDKAQKFALRHWLEAIDPRHRYGHNLNFYYEVWFRSQSYQPFFYWLDVGDGKEVELKACPRKDLQDQCIKYLGPKEREAYEVIVEGGRLVYKESKNLVHTTEESKWIFVLSLSRVLYVGRKNKGHFQHSSFLAGGATIASGRLVAQHGVLQAIWPYSGHYRPTEKNFKEFISFLEEHSVNMTNVKKDAVDEDVPPSQPANDEKLAFEYMDGNANKNGKEKAEEGSVHENKPMSSKWSTGVGPRIGCVREYPTKFQVQALEQLNLSPRDNQGTFADKAPIPSPRPRTKHLSPKLVNMGLPSPMLQGH* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2546 466 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 457 IPR044159 -
Vra5g2546 466 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 1 457 - -
Vra5g2546 466 MobiDBLite consensus disorder prediction 372 398 - -
Vra5g2546 466 MobiDBLite consensus disorder prediction 426 466 - -
Vra5g2546 466 MobiDBLite consensus disorder prediction 373 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2546 Vra-Chr5 32257786 32260619 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2546 - - gmx:100786055 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2546 5 32257786 32260619 Vra5g2546 5 32257786 32260619 ECH
Vra9g0267 9 1984715 1988888 Vra5g2546 5 32257786 32260619 PCT