Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2518 ATGACTAACTACGGCACAATCCCAACTTCCTCTTCACCTTCCACCAACCTCGAGTTTATCTCACGCGCCAAGCAGCGGGTCAAGGAGGGTCTCGCCACGCGCCGTCCATGGAAGATCATGTTCAACTTCCGCTCCTTCGCCCTTCCGGCCGGTTTCTCCGACGCCGTGAGGCGCGTGCGGGAGAACGTCGGCTACTTCCAGATGAACTACGCCATCGTGGTGCTCATAGTGCTCTTCCTCAGTCTCCTCTGGCATCCAATATCGCTGATCGTGTTCGTGGTGCTCGTGGCGGCGTGGCTCTTCCTTTACTTCCTCCGCGACGAGCCGCTCGTCGTGCTCGGCCGGATGATCAGCGACCGCGTCGTGCTCGTCGTCATGGCGGTGCTGACCATCGCCCTCCTCCTCCTCACCGGTGCCGTCTCCAACATCCTGGTGGCACTCCTCATCGGAGTGGTCTTGGTGGTGGCGCACGCCGCCTTCAGAAGAACCGATGATTTGTTCTACGACGAAGAAGAGGCCACTGCTCGCTTCGTTCCTCCTCCTCCTAATCCTCATCCCGGTGCTCCTCTTTCTTGA 576 0.5955 MTNYGTIPTSSSPSTNLEFISRAKQRVKEGLATRRPWKIMFNFRSFALPAGFSDAVRRVRENVGYFQMNYAIVVLIVLFLSLLWHPISLIVFVVLVAAWLFLYFLRDEPLVVLGRMISDRVVLVVMAVLTIALLLLTGAVSNILVALLIGVVLVVAHAAFRRTDDLFYDEEEATARFVPPPPNPHPGAPLS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2518 191 Pfam PRA1 family protein 31 171 IPR004895 -
Vra5g2518 191 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 177 IPR004895 -
Vra5g2518 191 PANTHER PRA1 FAMILY PROTEIN F2 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2518 Vra-Chr5 32084775 32085679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2518 K20359 - gmx:100526887 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2518 5 32084775 32085679 Vra5g2518 5 32084775 32085679 ECH
Vra5g2518 5 32084775 32085679 Vra9g0241 9 1766342 1767069 PCT