Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2435 ATGCGAATCTCAAAAGCTTCCTTTTACGCTCTCCTCCTCCACAAACCTTACAACCACCAAAACCTCGTCGTTTTATCGCGGCGTCGTGTTATCTCGTGCGCGCTGAGTATGGCGCTGCTCGTGAGCACGCTCTACGTTCTGTGGCCGTCGGATCCAGATCTGAAGATCGTGGGGCTGAAGCTGCGGCGGATAAAGGTGCACCCTGTGCCGCCCGTCACCGTGGACATCTCCATGCTGCTGACGCTCCAGGTCCGCAACGCTGACGTGTACTTCATGGACTTGGGTGCGGTAAACGTGGCAGTGGCGTACAGAGGGAAGATGCTGGGTCACGTGAGGTCGAGGGAGGTGCACGTGAGGGCGAGGGGGTCTTCCCACGTGGATGCTGACGTGGAATTCGCCGGCATTACTGTTCTGCCTGAGCTGGTGCTGCTTCTGGAGGACGTGGCCAAAGGTATCGTACCCTTTGACACAGTTAGCCACACTGGTGGCCAATTCGGCCTTTTCTTCTTTCACTTCCCCATCAAGGCAAAAGTATCATGTGAGGTTCTGGTGAGTATAGTAAACCAGACTATCATTCGTCAACATTGTCTCCACGAGTGA 600 0.5517 MRISKASFYALLLHKPYNHQNLVVLSRRRVISCALSMALLVSTLYVLWPSDPDLKIVGLKLRRIKVHPVPPVTVDISMLLTLQVRNADVYFMDLGAVNVAVAYRGKMLGHVRSREVHVRARGSSHVDADVEFAGITVLPELVLLLEDVAKGIVPFDTVSHTGGQFGLFFFHFPIKAKVSCEVLVSIVNQTIIRQHCLHE* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2435 199 SUPERFAMILY LEA14-like 37 147 - -
Vra5g2435 199 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 13 198 - -
Vra5g2435 199 Pfam Late embryogenesis abundant protein 81 180 IPR004864 -
Vra5g2435 199 PANTHER EXPRESSED PROTEIN 13 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2435 Vra-Chr5 31448282 31449983 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2435 - - gmx:100792375 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2435 5 31448282 31449983 Vra9g0140 9 926695 930576 PCT