Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2386 ATGCTTCACGAAATGAAAGAAAGCGTGGAAAACCCTCTGCACCTAAAATCTGTCAACCATATCTCTCTCATCTGCACCTCCGTCGTAAAATCCATCAACTTCTATCAGAACATTCTCGGCTTCTTCCCCATCAGGAGGCCAGGATCATTGGATTTTGACGGAGCATGGCTATTCGGATATGGAATTGGAATTCACTTGCTTCAAGCAGAGGACCCTAGCAACATTCCAAGAAAGAAAGAAATTAATCCGAAAGATAATCACATATCATTCCAGTGTGAAAGCATGGGAGCAGTGGAGAAGAAGCTTGAGGAAATGGAGATAGAATACGTGCGTGCAACGGTGGAGGAAGGTGGGATCAAAGTGGATCAGTTGTTTTTTCATGACCCAGATGGGTTCATGATTGAGATATGCAACTGTGATATCCTTCCAGTGATTCCTTTAGCAAGTGACATGGTTAGGTCATGCTCTCGAATGAACCTTCAGATGCTTCAACAGAGACAGATACACCAAATTGTGAAACAGGACTCAACTTTTCCTTCGGGTCACACCAAAATTCAAAACACTATTGTTTAG 573 0.4276 MLHEMKESVENPLHLKSVNHISLICTSVVKSINFYQNILGFFPIRRPGSLDFDGAWLFGYGIGIHLLQAEDPSNIPRKKEINPKDNHISFQCESMGAVEKKLEEMEIEYVRATVEEGGIKVDQLFFHDPDGFMIEICNCDILPVIPLASDMVRSCSRMNLQMLQQRQIHQIVKQDSTFPSGHTKIQNTIV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2386 190 Coils Coil 95 115 - -
Vra5g2386 190 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 17 139 IPR037523 -
Vra5g2386 190 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 136 IPR004360 -
Vra5g2386 190 PANTHER - 5 173 - -
Vra5g2386 190 CDD VOC_like 18 136 - -
Vra5g2386 190 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8 138 IPR029068 -
Vra5g2386 190 PANTHER BNAC05G11680D PROTEIN 5 173 - -
Vra5g2386 190 Gene3D - 10 141 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2386 Vra-Chr5 31012547 31013725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2386 - - gmx:100305695 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2386 5 31012547 31013725 Vra9g0101 9 637305 638947 PCT