Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2374 ATGTTGAATAATGCTGGTGTTGCAGGACATAACATTGCTGCAGATGATGAGGTAAAAGAATTAATTGCAGTAGGTGTTTCAACAACAACAGATGAAGATGAACAATCACTGCTCCTGCTTAGCCGTTGGAAATGGTGGTTTTTAGTAGTAATCAACGTAGCTATACTCTTGATGGGTCAATCTGGTGCAGTCTTGCTAGGGAGATTCTACTTTGACCAAGGAGGAAAAAGCATATGGATGGCAACACTAGTACAATCTGTGGCTTTTCCAATCCTTTTCTTTCCACTTTTCTTCTTCCCTCACTCAGAAAACCCTTCTGTCAGCACTGACCTCACCATAAACACTTCTACTCACACTGTCATCATGGTTTACATCCTCTTGGGTACCCTATTAGCTGGAGATAACTTGATGTACACAATAGGGCTTCTATACCTTCCTGTATCTACTTATTCCCTTATCTGTGCATCCCAACTTGCTTTCAATGCCATATTTTCCTTCTTTATCAATGCTCAAAAACTCACCTTGTTAGTACTTAACACAGTGGTTTTTCTCACCATATCAGCTTCACTTCTAGCAGTTCATTCTGACTCCTCAGAGAATGAAACGATGAATGTTACCAGCAGCAAGCACATGGTTGGTATTTCGTGCACTATCGGTGCATCAGCTGGTTATGCCCTTTTGCTGTGCCTGATGCAGGTGTCATTTGAAAGAGTGTTGAAGAGGGAAACATTTTCTGTTGTCCTAGACATGCAGATTTGGACATCTTTTGTTGCTTCATGTGTTTGCATAGTCGGAATGTTTGCCAGTGGAGAATGGCAGGGTTTGAGGGATGAAATGAGGAGATTCAAAGCAGGAAGAGAGGTTTACATTCTGACCCTTGCTGGAACTGCTTTGGCTTGGCAGATTTGTTCTGTTGGAGTTGTGGGGCTGATCTATTTGGTGTCTTCCTTCTTCTCCAATGTTATGAGCATGCTGAACTTACCACTTGTTCCTGTTGCTGCAGTTCTTCTATACCATGAACATATCGATGGTGTTAAGATTGTGGCCATGTTATTGTCAATCTTCGGTTTCAGTTCTTATATTTACCAAAATTATTTGGACGATACCAAGTCCAAAGCACCAGAAGGAATTCATGATACTGCTACCCCAGAAACCTCCATTTCTTGA 1167 0.4156 MLNNAGVAGHNIAADDEVKELIAVGVSTTTDEDEQSLLLLSRWKWWFLVVINVAILLMGQSGAVLLGRFYFDQGGKSIWMATLVQSVAFPILFFPLFFFPHSENPSVSTDLTINTSTHTVIMVYILLGTLLAGDNLMYTIGLLYLPVSTYSLICASQLAFNAIFSFFINAQKLTLLVLNTVVFLTISASLLAVHSDSSENETMNVTSSKHMVGISCTIGASAGYALLLCLMQVSFERVLKRETFSVVLDMQIWTSFVASCVCIVGMFASGEWQGLRDEMRRFKAGREVYILTLAGTALAWQICSVGVVGLIYLVSSFFSNVMSMLNLPLVPVAAVLLYHEHIDGVKIVAMLLSIFGFSSYIYQNYLDDTKSKAPEGIHDTATPETSIS* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2374 388 PANTHER OS09G0467300 PROTEIN-RELATED 27 375 IPR030182 GO:0015211|GO:0016021
Vra5g2374 388 Pfam Purine nucleobase transmembrane transport 48 369 - -
Vra5g2374 388 PANTHER PURINE PERMEASE 19-RELATED 27 375 - -
Vra5g2374 388 SUPERFAMILY Multidrug resistance efflux transporter EmrE 88 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2374 Vra-Chr5 30775931 30777220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2374 12 384 Organic Solute Cotransporters AT4G18220 44.764 4.10e-112 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2374 - - gsj:114375891 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2374 5 30775931 30777220 Vra5g2374 5 30775931 30777220 ECH