Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2372 ATGCTTGGAGCTGTAGCAGCTTCCACAGCACTATGTTTTTCACCTTCGACGCCCCCCACAAGAATTTTTGTTCATAGAGGAGTCTCAAATTCAACATTGCCATTGAGCAACCATGGCCACTCTTTCTCACTCTTATCATCCACCCCTATGCATTTCTCTTCACTCAGCAGTAGAAGACAACCCCTTTTCCTTACACAAGCTGCTTCATCTTCAGCTGCAAATGCTGAATACGTGGAGGAGCCAGCAACAAACGTGAAATTCCAGACATGTTTGAATTTTCCGGGTTGCTCAAATTCATTAACTTTGTTTGGAACTGGATACAGAGAGAAAGTTTTTGCAATTATTGGTGTTAAGGTCTATGCTGCAGGTTTGTATCTAGATCAATCTATTACCCCTGAATTGAATGCTTGGAAAGGGCTATCAAAAGATGCCATTCAGGGGAATTCTTCCTTGTTCCAGACTATTTTCCAATCTTCCTTTGAGAAATCATTGCAAATTATTCTTGTGAGAGATGTTGATGGTCAAACATTTTGGGATGCATTAAGTGATGCCATAGCTCCAAGAATTCCAGCATCCACATCTGCTGATGAAACTGCTTTGACCACTTTCCGTGGTGTCTTTCTAGATCGCTCTCTTAAGAAAGGAACTTTCATACTTCTGACTTGGTTGAACCCCACCAAATTGCTTGTTTCTGTCTCCCCAAACAGGTTTCCATCTACTGTAGATGCTACAATTGAATCTGCAAATGTGGCTTCTGCCCTTTTTAATGTATTCCTTGGAGATAGTCCTGTTTCTCCCTCCTTGAAATCTTCAGTGGCTGAAGGCTTGTCAAAAGTACTCAAATAG 846 0.4149 MLGAVAASTALCFSPSTPPTRIFVHRGVSNSTLPLSNHGHSFSLLSSTPMHFSSLSSRRQPLFLTQAASSSAANAEYVEEPATNVKFQTCLNFPGCSNSLTLFGTGYREKVFAIIGVKVYAAGLYLDQSITPELNAWKGLSKDAIQGNSSLFQTIFQSSFEKSLQIILVRDVDGQTFWDALSDAIAPRIPASTSADETALTTFRGVFLDRSLKKGTFILLTWLNPTKLLVSVSPNRFPSTVDATIESANVASALFNVFLGDSPVSPSLKSSVAEGLSKVLK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2372 281 Pfam Chalcone-flavanone isomerase 84 278 IPR016087 GO:0016872
Vra5g2372 281 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 41 280 - -
Vra5g2372 281 Gene3D - 87 258 IPR016088 -
Vra5g2372 281 Gene3D - 130 276 IPR016089 -
Vra5g2372 281 PANTHER FATTY-ACID-BINDING PROTEIN 3, CHLOROPLASTIC 41 280 - -
Vra5g2372 281 SUPERFAMILY Chalcone isomerase 77 281 IPR036298 GO:0016872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2372 Vra-Chr5 30761557 30765449 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2372 - - gmx:100804241 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2372 5 30761557 30765449 Vra5g2372 5 30761557 30765449 ECH