Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2232 ATGCTTTTGGTTAGGAAGGTTGCTGCAATGGGGAAGGTTGTGTTGTTGTTTCTTTACATGTTGGTGGTGGTGGTGCCTTTGGCTTTTGCTGATTCAAGTCAGAAGCTTCAGGTTCAGAAGCAATTGAAGAACTTGAATAGGCCTCCTGTAAGGTCCATCAAGAGTCCTGATGGAGATATCATTGACTGCGTCCATGTCTCTCACCAGCCAGCTTTGGATCACCCTGACCTCAAAAATCACAAGATTCAGATGAAACCAAGTTTCCATCCTGAAGGGCACCCTTTTGGGGAGAGCAAAGTCTCTTCAAATTCGAAGCCTATTACTCAGCTGTGGCACCGAAAAGGAAGGTGCCCTCAAGGAACAATTCCTGTCAGAAGGACCTCAAAGAATGACATACTAAGGGCAAGCTCTATTCAACAATTTGGAAAGAAGAAGGTAAGGAGCTTTCCTCAGCCAAAGCCAGCAAAACCTCTACCAGACCTCATCAGTCAGAGTGGCCACCAGCATGCCATAGCTTATGTGGAGGGGGATAAGTATTATGGAGCCAAGGCAACCATAAACGTTTGGGAGCCAAAAATTCAACAACCCAATGAATTTAGCCTGTCTCAAATGTGGATTCTAGGTGGCTCTTTTGGTCAAGATCTCAACAGTATTGAAGCAGGTTGGCAGGTCAGCCCTGATTTGTATGGAGACAACAACACTAGACTCTTCACTTATTGGACAAGTGATGCATATCAAGCTACTGGTTGTTATAATCTCCTTTGCTCTGGCTTTATTCAAATTAACAGTGATATAGCTCTAGGAGCAAGCATCTCCCCTCTTTCCAAGTATAGCTCTTCCCAATATGATATCAGCATCCTGGTCTGGAAGGACCCCAAAGAGGGTAACTGGTGGATGCAGTTTGGAAGTGATCATGTTATGGGATACTGGCCAGCTCCTCTATTCTCGTACCTTTCTGACAGTGCCTCAATGATTGAGTGGGGAGGAGAGGTTGTGAACTCTGAATCTGATGGCCAACACACCTCAACTCAAATGGGAAGCGGCCATTTCCCTGAGGAAGGTTTTGGCAAGGCTAGTTACTTCAAGAACATTCAGATTGTTGATGGTAACAACAAGCTTAGAGCTCCAAAAGATCTTGGCACTTACACTGAGCAAGATAGCTGCTACAATGTTCAAACTGGCAGTGCTGGAGATTGGGGTAACTACTTCTATTATGGTGGTCCTGGTAGAAACCCCAATTGCCCTTGA 1248 0.4519 MLLVRKVAAMGKVVLLFLYMLVVVVPLAFADSSQKLQVQKQLKNLNRPPVRSIKSPDGDIIDCVHVSHQPALDHPDLKNHKIQMKPSFHPEGHPFGESKVSSNSKPITQLWHRKGRCPQGTIPVRRTSKNDILRASSIQQFGKKKVRSFPQPKPAKPLPDLISQSGHQHAIAYVEGDKYYGAKATINVWEPKIQQPNEFSLSQMWILGGSFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINSDIALGASISPLSKYSSSQYDISILVWKDPKEGNWWMQFGSDHVMGYWPAPLFSYLSDSASMIEWGGEVVNSESDGQHTSTQMGSGHFPEEGFGKASYFKNIQIVDGNNKLRAPKDLGTYTEQDSCYNVQTGSAGDWGNYFYYGGPGRNPNCP* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2232 415 Pfam Neprosin 197 408 IPR004314 -
Vra5g2232 415 Gene3D - 190 309 - -
Vra5g2232 415 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 13 413 - -
Vra5g2232 415 PANTHER - 13 413 - -
Vra5g2232 415 Pfam Neprosin activation peptide 52 173 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2232 Vra-Chr5 28327558 28331060 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g2232 - - gmx:100790139 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2232 5 28327558 28331060 Vra5g2232 5 28327558 28331060 ECH