Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1894 ATGGCGAAAGTTTTCTGTGACTTTAGGTTCCTCCTCTTGGTTGCAGCTGGGATCTTCATCTATATCCAGACGAGGCTTTTCGCAACACAATCAGGATATGCTGATCGCCTAGCTGCAGCTATTGAAGCTGAAAACCATTGTACAAGTCAAATGCGATCACTGATTGACCAGATTAGCTTGCAGCAAGGACGAATTGTGGCCTTAGAAGAAGAGAGGAAACGTAGAGACCAAGAATGTGGACAAATGAAGTCTCTTGTACAAGATCTGGAAAGAAAAGACCTACAGAGGCTGACTGACAAAATGCAGGTTCCGGTGGCTGCTGTTGTGATCATTGCATGTAATCGTGCTGATTACCTGGAGAGGACTATTAATTCTGTGTTAAAACACCAAAGGCCCATTTCTTCAAGATTTCCTTTATTTGTATCTCAGGATGGATCAAATCCAGATGTTAAAAGTACGGCTTTGAGCTATGATCAGTTATCTTATATGCAGCACTTGGATTTTGAACCAGTTCAAACTGAACGACCAGGAGAATTAATTGCTTACTACAAAATTGCACGTCATTACAAGTGGGCTTTAGATCAGCTGTTCTACAAGCATAACTTCAGCCGAGTAATCATCCTTGAAGATGACATGGATATAGCACCTGATTTCTTTGATTATTTTGAAGCTGCAGCAACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCCTCGTGGAATGATAATGGACAAAAGCAATTTGTACATGATCCATATGAACTGTACCGATCAGATTTCTTTCCTGGGTTAGGATGGATGCTGGCCAGATCTATATGGGATGAGTTATCACCAAAATGGCCTAGGGCTTACTGGGATGATTGGTTGAGACTAAAAGAAAATCACAAAGGGCGCCAGTTTATCCGACCTGAAGTGTGCAGAACATATAATTTTGGTGAGCATGGTTCTAGTTTGGGACAGTTTTTTAAGCAATATCTGGAGCCAATCAAGCTGAATGATGTCAAGGTTAACTGGAGATCAATGGATCTGAGCTATTTACTGGAGGATAAGTATTCCATGCATTTTGCCAATACTGTTAAGAAAGCTACACCTGTCTATGGAGCTGGCGTGGTTCTAAAAGCATATAATATAGATGGTGATGTGCGTATCAAGTATAGAGATCAGTCAGACTTTGAAAACATTGCTCGCCAATTTGGTATATTTCAAGAGTGGAAGGATGGAGTACCGAGGACTGCCTATAAAGGAGTAGTCGTTTTCAGACATCAAACCTCAAGACGTATATTCCTTATTGGTCCAGAGTCTTTGAAGCTCCTTCAGATCGAAGAGTCTTAA 1335 0.4105 MAKVFCDFRFLLLVAAGIFIYIQTRLFATQSGYADRLAAAIEAENHCTSQMRSLIDQISLQQGRIVALEEERKRRDQECGQMKSLVQDLERKDLQRLTDKMQVPVAAVVIIACNRADYLERTINSVLKHQRPISSRFPLFVSQDGSNPDVKSTALSYDQLSYMQHLDFEPVQTERPGELIAYYKIARHYKWALDQLFYKHNFSRVIILEDDMDIAPDFFDYFEAAATLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLARSIWDELSPKWPRAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNDVKVNWRSMDLSYLLEDKYSMHFANTVKKATPVYGAGVVLKAYNIDGDVRIKYRDQSDFENIARQFGIFQEWKDGVPRTAYKGVVVFRHQTSRRIFLIGPESLKLLQIEES* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1894 444 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 442 - -
Vra5g1894 444 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 104 327 IPR029044 -
Vra5g1894 444 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 1 442 - -
Vra5g1894 444 Coils Coil 51 71 - -
Vra5g1894 444 Pfam GNT-I family 15 441 IPR004139 GO:0006486|GO:0008375
Vra5g1894 444 CDD GT13_GLCNAC-TI 105 435 - -
Vra5g1894 444 Gene3D - 369 441 - -
Vra5g1894 444 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 441 IPR029044 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1894 1 444 Glycosyltransferase AT4G38240 70.495 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1894 K00726 - gmx:100795005 855.899