Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1886 ATGAAGATGGCGCTGCTCAAGGCACCCACACCCCAACTGCAATGGCGCTGCAGTGTTGCGCCCACCACGCTGGCGTTTCCTTCTTCTCATTCCATTTCTACGGGAAGGGGAAAAGGAAGAGAGTGGAGTTGGAGGGTGAAATGCAGCAGCAGTGCCGGTGCGGAGATTGAGAAAGGGACTGCCAATTTTGGGCCGGGGAGCCCAGTCAGGCCAACCAGCATTCTAGTGGTGGGGGGCACCGGAACACTTGGAAGGCAGATTGTGCGACGGGCACTCGACGAAGGCTACGACGTCAGGTGTCTGGTCAGGCCCAGGCCCGCTCCTGCTGACTTCCTTCGCGATTGGGGAGCAACCGTTGTCAATGCTGACCTCAGTAAACCAGAGACCATTCCTGCTACCTTGGTCGGCATTCACACCGTCATTGACTGCGCCACTGGCCGTCCCGAGGAGCCTATCAAAACCGTAGACTGGGAAGGAAAAGTGGCTCTCATACAATGTGCCAAGGCAATGGGCATTCAGAAATATGTCTTCTACTCCATCCACAATTGTGACAAACATCCCGAGGTTCCCCTCATGGAAATCAAGTATTGCACTGAGAAGTTCCTCCGTGATTCTGGCCTCAATCACATCGTCATCCGCTTATGCGGTTTCATGCAGGGTCTTATTGGTCAGTACGCAGTTCCCATCCTTGAAGAAAAATCTGTTTGGGGAACTGATGCCCCCACCAGAATAGCTTACATGGATACTCAGGATATAGCTCGCTTGACATTTATAGCCATACGAAATGAGAAATTAATTGGTAAACTTCTAACATTCGCTGGTCCCCGTGCTTGGACAACCCAAGAGGTAATAACCTTGTGCGAGAGGCTCGCTGGCCAAGATGCTAATGTCACCACAGTTCCAGTCTCCATTTTAAGATTCACTCGTCAGTTGACTCGTGTTTTTGAGTGGACAAATGATGTTGCTGACAGACTCGCATTTTCAGAGGTCCTTAGCAGCGATACTGTGTTTTCTGTTCCAATGGCGGATACATATAATCTTCTTGGAGTTGATTCAAAAGACATAGTTACACTGGAAAAGTATTTGCAAGACTACTTCAGTAACATATTAAAGAAATTGAAGGATCTCAAGGCCCAGTCAAAGCAAACAGATATTTACTTCTGA 1164 0.4914 MKMALLKAPTPQLQWRCSVAPTTLAFPSSHSISTGRGKGREWSWRVKCSSSAGAEIEKGTANFGPGSPVRPTSILVVGGTGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLRDSGLNHIVIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIAIRNEKLIGKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSILRFTRQLTRVFEWTNDVADRLAFSEVLSSDTVFSVPMADTYNLLGVDSKDIVTLEKYLQDYFSNILKKLKDLKAQSKQTDIYF* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1886 387 Gene3D - 73 352 - -
Vra5g1886 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 355 IPR036291 -
Vra5g1886 387 Pfam NmrA-like family 74 295 IPR008030 -
Vra5g1886 387 PANTHER - 7 387 IPR044256 -
Vra5g1886 387 CDD SDR_a5 74 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1886 Vra-Chr5 24596922 24600586 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1886 - - gmx:100797608 711.449