Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1877 ATGGAAGGGGAAGGAGAAAGGGAAAGGAAAAGAGGAGGGCGTGTATGCTGCGTTTGCAACAAGGAAAGAGCTTCCGTGAAGAGGCCCAAAACCCTACAGCACATGTGTAGGGAATGCTTCTTCAATGCTTTCGAATCTGAGATCCATCAGGTTATCATTCAAAACTCCCTCTTCACCGCCGGTGACCGCGTCGCCATCGGTGCTTCTGGCGGCAAGGATTCCACCGTCCTTGCCTATGTCCTCTCTAAACTCAACCGCCTCCACAATTACGGCCTCCATCTCTTCCTCTTGTCCGTCGACGAGGGAATCACCGGCTACCGCGACGACTCTCTCCAGACCGTTCATCGGAATCACCTTCAGTACCAACTCCCTCTCCAAGTGGTTTCCTACAAGGACTTGTACGGATGGACCATGGACCAAATCGTTGACGTCATTGGCTTCAAAAACAACTGCACTTTCTGTGGCGTCTTCCGTCGCCAGGCCCTTGATCGAGGTGCTGCTCTCTTGAAGGTCGACAAACTCGTTACTGGTCACAACGCCGATGACATTGCCGAGACCGTTCTCCTCAACCTCTTGAGAGGAGATGTTGCTAGATTGAGTAGGTGCACCTCTATTACCACCGGCGAAGATGGGCCAATTCCCAGGTGCAAGCCTTTCAAGTATACGTACGAGAAGGAGATCGTCATGTATGCATATTTCAAGAAGCTCGACTACTTTTCCACCGAATGCATCTATTCCCCAAATGCATATCGAGGTTTTGCTCGCGAGTTCATCAAAGATTTGGAAAGAATCAGACCTAGAGCCATTCTTGACATCATCAAATCGGGGGAGAATTTCAGGATTTCTACTACTACCAAAATGCCCGAACAGGGAACATGCCAACGGTGTGGTTATATTTCTAGTCAGAAATGGTGTAAAGCTTGTGTTCTGCTTGACGGACTGAATAGAGGATTGCCAAAACTGGGGATTGGACGAAGTCGTGGCGGTGTTGGTTCTGAGAACGGAAATGAAAGTAAAGTACATAAGAGCATCCAGGGAAAACAGTGTGGAACTCTAGACTTTTGA 1065 0.4892 MEGEGERERKRGGRVCCVCNKERASVKRPKTLQHMCRECFFNAFESEIHQVIIQNSLFTAGDRVAIGASGGKDSTVLAYVLSKLNRLHNYGLHLFLLSVDEGITGYRDDSLQTVHRNHLQYQLPLQVVSYKDLYGWTMDQIVDVIGFKNNCTFCGVFRRQALDRGAALLKVDKLVTGHNADDIAETVLLNLLRGDVARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVMYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGENFRISTTTKMPEQGTCQRCGYISSQKWCKACVLLDGLNRGLPKLGIGRSRGGVGSENGNESKVHKSIQGKQCGTLDF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1877 354 CDD Alpha_ANH_like_II 63 249 - -
Vra5g1877 354 Pfam Zinc-ribbon 291 321 IPR032442 -
Vra5g1877 354 Hamap Cytoplasmic tRNA 2-thiolation protein 1 [CTU1]. 14 326 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vra5g1877 354 PANTHER ATPASES OF THE PP SUPERFAMILY-RELATED 15 342 - -
Vra5g1877 354 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 280 - -
Vra5g1877 354 Pfam PP-loop family 64 251 IPR011063 -
Vra5g1877 354 MobiDBLite consensus disorder prediction 329 354 - -
Vra5g1877 354 PIRSF ATPase_YdaO 14 323 IPR035107 GO:0008033
Vra5g1877 354 Gene3D HUPs 15 330 IPR014729 -
Vra5g1877 354 MobiDBLite consensus disorder prediction 331 345 - -
Vra5g1877 354 PANTHER CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 15 342 IPR000541 GO:0000049|GO:0002098|GO:0034227
Vra5g1877 354 TIGRFAM TIGR00269: TIGR00269 family protein 213 312 IPR000541 GO:0000049|GO:0002098|GO:0034227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1877 K14168 - gmx:100816096 652.899