Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1871 ATGAGTGCTGTGAACATCACCAACGTCACCGTCCTCGACAACCCTGCTTCCTTTCTCACCCCTTTTCAGTTCGAGATTTCCTACGAATGCCTCACCGCTCTCAAAGACGATTTGGAATGGAAGCTCATATATGTTGGATCTGCTGAGGATGAGACCTATGACCAATTATTAGAAAGTGTCCTTGTTGGTCCTGTCAATGTTGGAAACTATCGCTTCGTTTTACAGGCAGATCCACCGGATCCATCAAAGATTCGTGAAGAAGATATAATTGGTGTGACAGTGCTTCTGTTGACGTGCTCTTATCTGGGACAGGAATTTATTCGTGTTGGCTATTATGTGAACAATGATTATGATGATGAGCAGCTGAGAGAGGAACCCCCACCAAAGGTGTTAACTGATCGGGTTCAAAGGAACATTTTGTCTGATAAACCCAGGGTCACGAAGTTCCCCATCAATTTCCACCCTGAGAACAATGAAAATGAAGAGCAACCCCCTCCGTCCGAGCACCCATCTGAAACTGGAGAAGATCCGCTTGCCTTAGTTGATCGTGATCCTGCAGATAGGAAGGATTCTTAA 576 0.4531 MSAVNITNVTVLDNPASFLTPFQFEISYECLTALKDDLEWKLIYVGSAEDETYDQLLESVLVGPVNVGNYRFVLQADPPDPSKIREEDIIGVTVLLLTCSYLGQEFIRVGYYVNNDYDDEQLREEPPPKVLTDRVQRNILSDKPRVTKFPINFHPENNENEEQPPPSEHPSETGEDPLALVDRDPADRKDS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1871 191 PANTHER ANTI-SILENCING PROTEIN 1 1 176 IPR006818 GO:0005634|GO:0006325
Vra5g1871 191 MobiDBLite consensus disorder prediction 161 191 - -
Vra5g1871 191 MobiDBLite consensus disorder prediction 145 191 - -
Vra5g1871 191 Pfam ASF1 like histone chaperone 1 153 IPR006818 GO:0005634|GO:0006325
Vra5g1871 191 SUPERFAMILY ASF1-like 1 153 IPR036747 GO:0005634|GO:0006325
Vra5g1871 191 Gene3D - 1 157 IPR036747 GO:0005634|GO:0006325
Vra5g1871 191 PANTHER HISTONE CHAPERONE ASF1B-RELATED 1 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1871 K10753 - gmx:100801694 364.385