LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vra5g1864	ATGGAGTTGGCACAACTAGAAGCATTGTGCGAGAGGCTGTACAATTCGCAGGACTCGGTTGAACGTGCTCACGCGGAGAACACACTGAAATGTTTTTCCATGAACACTGAATACATTTCCCAATGCCAATACATACTTGATCATGCCTTGACACCCTACGCATTGATGCTTGCTAGTTCCAGTTTGTTGAAACAAGTCACGGAACACAGCCTTGCCTTGAAGCTTCGCCTTGATATATGGACATACCTCATAAACTATCTAGCGACCAGAGGACCTGAGTTACAGCCATTTGTGACTGCTTCTTTGATCCAACTTTTATGTCGAGTTACAAAGTTCGGATGGTTTGATGATGACCGATTCCGGGACCTGGTAAAAGAATCAATGAACTTCTTGAGTCAGGCAACACCAGGTCATTATGCCATTGGTTTGAAGATCCTAAGTCAGCTTATCTCTGAGATGAATCAGGCTAATGCTGGTATGCCTGCAACAATTCATCGAAGGGTTGCTTGCTCTTTTAGAGACCAATATCTTTTTCAGATATTCCAGATATCTTTAACATCATTGGGTCAACTGAAAAATGATGTGGTCAATCAAATGCAAGAATTGGCACTTGCTCTTTCTTTGAAATGTTTATCATTTGATTTTGTGGGGACATCTGTTGATGAAAGTTCGGATGAGTTTGGCACAGTTCAGATTCCATCACCTTGGAAGCCTGTTTTGGAGGAGTCTTCAACACTACAAATATTTTTTGATTACTATGGCATTACAAAGCCCCCTCTTTCAAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCGTCTGTAAGACGCTCTTTGTTTACAAATGATGCTGCCCGTTCTAAATTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATGATAATTACCATGAGTTTTGTCGTCTTCTTGGTCGTTTCAGAGTAAATTATCAGTTGTCGGAGCTTGTTAATGTGGAAGGCTACAGCGATTGGATACGTTTGGTTGCAGAGTTTACTCTCAAATCTTTGCAATCATGGCAGTGGGCAAGCAATAGTGTGTACTACCTGTTAGGGCTGTGGTCTAGATTGGTGTCTTCTGTTCCATATTTAAAAGGTGACGCACCAAGCTTACTGGATGAATTTGTTCCCAAGATTACCGAGAATTTCATCACATCAAGATTCAATTCAGTACAGGCTGGATTGCCTGATGATCTTTCTGAGAACCCCTTAGACAATGCCGAACTTCTTCAGGATCAATTAGACTGCTTCCCATACCTATGTAGATTTCAGTATGAAAGCAGTAGTTTATTTATAATAAACGTAATGGAGCCAATCCTGCAAATATACACGGAAAGAGCAAGATTACATGTTCCTGATAACAGTGACCTCAGTGTGATTGAAGATAAACTTGCTTGGATTGCTCATATCATTGCCGCAATACTTAAGATAAAACAGTGTACTGGTTGTAGTTTGGAATCCCAGGAAGTGCTTGATGCTGAACTTTCTGCTCGAGTGTTGCAGTTGATAAATGTAACTGACAGTGGAATACATAGCCAGAGATATGGTGAGATAAGCAAACAAAGACTAGATAGGGCAATTCTTACTTTCTTTCAGCATTTCCGAAAGTCTTATGTAGGAGATCAGGCCATTCATTCTTCCAAGCAGTTATATACCCGGTTATCTGAACTTCTTGGCCTACATGATCATCTATTATTGTTGAATGTTATTATTGGCAAGATTGTGACTAACCTTAAGTGCTACACAGAGAGTGAAGAGGTCATTGATCACACCTTGAGTTTGTTTTTGGAGCTTGCATCTGGCTACATGACTGGAAAGCTACTTCTGAAGTTGGACACAGTGAAATTTATTGTTGCCAATCATACGAGGGAGCATTTTCCATTTTTGGAGGCAAAAAGATGCACTCGCAGCAGAACAACATTCTATTACACTATTGGCTGGTTGATATTCATGGAAGATAGTCCCGTGAAATTTAAATCTTCAATGGATCCACTCCAACAGGTTTTTCTGAGTTTGGAATCAACCCCTGATGCAGTATTTCGAACAGATGCTGTAAGGTCTGCACTTGTTGGTTTGATGAGGGACCTTAGAGGAATTGCAATGGCCACAAACAGCCGCCGAACATATGGATTTCTCTTTGATTGGTTGTATCCTGCACACATGCCTCTACTCTTAAAGGGCATCTCACATTGGACAGACACCCCAGAGGTTACTACACCATTGTTAAAGTTCATGGCTGAGTTTGTGCAAAATAAAGCTCAACGTTTGACTTTTGATTCTTCTTCTCCCAATGGCATACTTCTTTTCCGGGAAGTTAGTAAACTGATTGTTGCTTATGGATCTAGAGTTCTGTCTCTTCCAAATGCTGCCGATATTTATACATACAAGTACAAAGGAATATGGATTTGTTTAACTATACTATCAAGAGCCCTTTCAGGAAATTATGTCAACTTTGGTGTGTTTGAACTATATGGTGACAGAGCTCTATCTGACGCTCTCGATGCTGCTCTAAAGATGACTTTGTCAATTCCTATGTCTGATATTTTGGCTTATAGGAAGCTAACAAGGGCTTATTTTGCATTCTTGGAGGTTTTGTTCAATAGCCACATCACATTTGTATTAAACTTGGACACAAACACCTTTATGCATATGGTTGGCTCCCTTGAATCTGGACTTAAAGGGTTGGATACAAATATCTCATCTCAGTGTGCATCTGCTGTTGATAATTTGGCTGCCTTCTATTTTAACAACATCACTATGGGGGAGGCTCCACATTTGCCTGCATCTGCCAACCTTGCTCGTCATATTGCAGAGTGTCCCAATCTGTTTCCAGAGATCTTGAAGACCCTATTTGAGATTATATTATTCGAAGACTGTGGGAACCAATGGAGTCTGAGCAGGCCAATGTTGAGCTTGATACTCATTAATGAGCAGATATTCTCTGATCTGAAAGCTCAAATCTTGTCATCACAGCCAATGGATCAGCACCAGCGGCTGTCTTCATGCTTCGACAAACTCATGGCAGATGTTACTCTAAGCATAGATTCAAAGAACAGGGACAAGTTTACTCAAAATCTCACCGTTTTTCGGCATGAATTCCGTGCCAAATAA	3156	0.4091	MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLALKLRLDIWTYLINYLATRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLKILSQLISEMNQANAGMPATIHRRVACSFRDQYLFQIFQISLTSLGQLKNDVVNQMQELALALSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKPVLEESSTLQIFFDYYGITKPPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKVILQTGQGLADHDNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVSSVPYLKGDAPSLLDEFVPKITENFITSRFNSVQAGLPDDLSENPLDNAELLQDQLDCFPYLCRFQYESSSLFIINVMEPILQIYTERARLHVPDNSDLSVIEDKLAWIAHIIAAILKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGIHSQRYGEISKQRLDRAILTFFQHFRKSYVGDQAIHSSKQLYTRLSELLGLHDHLLLLNVIIGKIVTNLKCYTESEEVIDHTLSLFLELASGYMTGKLLLKLDTVKFIVANHTREHFPFLEAKRCTRSRTTFYYTIGWLIFMEDSPVKFKSSMDPLQQVFLSLESTPDAVFRTDAVRSALVGLMRDLRGIAMATNSRRTYGFLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVQNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYTYKYKGIWICLTILSRALSGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTRAYFAFLEVLFNSHITFVLNLDTNTFMHMVGSLESGLKGLDTNISSQCASAVDNLAAFYFNNITMGEAPHLPASANLARHIAECPNLFPEILKTLFEIILFEDCGNQWSLSRPMLSLILINEQIFSDLKAQILSSQPMDQHQRLSSCFDKLMADVTLSIDSKNRDKFTQNLTVFRHEFRAK*	1052

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vra5g1864	1051	PANTHER	BNAA10G30440D PROTEIN	3	1051	-	-
	Vra5g1864	1051	SUPERFAMILY	ARM repeat	1	1035	IPR016024	-
	Vra5g1864	1051	Gene3D	-	825	1050	IPR011989	-
	Vra5g1864	1051	PANTHER	EXPORTIN 4,7-RELATED	3	1051	IPR044189	GO:0005049\|GO:0051169
	Vra5g1864	1051	Coils	Coil	3	23	-	-
	Vra5g1864	1051	Gene3D	-	1	614	IPR011989	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vra5g1864	Vra-Chr5	24453063	24470269	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vra5g1864	K18460		-	gmx:100804346	2013.04