Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1863 ATGGCATCCAACTGTGCCAATCGCTCTAATCCTTACCATCAATGCACTCAAGCTTGCTCTCAATCCACCAACCAAACCAAGATCACCACACACACAAGTAAAAACAAGATTAATTCAGGTTATGGTCGAAGTGTGACAGACGGTCAGCTTGGTAAAAAGGTTGATAAGCAAAAACGAATTTACTCAGCTTGTCCTAAAGCATCCAATCCTTACCACGAGTGTGATGACAATTGTTACAAAAGATTATCAGATTCAGGTGCCCCTCCTCCGTTAAAGTTAGACAGGAAAAGTAAGCTGGGTTCTAAACCAGAACCCCCCGTTCTTGACACTGTTCCTGCCTCAAAAGTTGGAGCAATTTACCTATCCGAGAAGAAAAAGGTTTTGAGAGAGAAAAACGAGCACGTTCCCTCTGAGCCAATTTCTGGACAGAAACAAGATCCAGTTGTAAAGCCTTCCTATCTCAAAGACCAACCAAGGGATCATGTTGCCAACTCAATGACAACAACTCACGACGAAAAAAAAACATCTCGTAAAGTTGTTCCAGTAACCCACCATGTTGACCACACTGAAGAATTGGGTCTTAATATTTCAGCTGGCGGATCCGTAGGTTCTACTTTCTCTGGTATTCCACGTGGAAATGAAGCAAATTTAAACGATGAAGCAGAGACGGAGTCCGTGAGTTCAGAACCCCGTCTTCAAGTTGGAAGATACAAAGTAAAAGAAAGTTTTGTTTCCATTCTGCAATCTATCTTTGACAGGTATGGGGACATAGGAGCCAGTTGTCACTTGGAATCAGTGGTGATGCGCTCGTACTACGTCGAGTGTGTGTGCTTTGTGGTGCAAGAGTTACACTCCTCCTCGTTGATTCAACTGAGCAGCTCCAAAGTGAAGGAATTGTTGGCCATTCTTAAGGATGTGGAATCTGCTGAACTTGACATTGCATGGTTGCGTAGCGCCCTCGACGAACTGGCCGAAAACATTGAACTCGTTAATAAGCAGCAGGTGGTAGAGGCGGAAAAGGATTACTCTGGTCACGAAGTGGAGACAATAAAAGAGGAGCTACGACAAGAGTTGGAAACTTTGGCTCAGAAAGAACAAGAGGTTGCTGATATCAAAGCACGAATTCCTGAGATCAGAGGTCGTTTGAGAGAGCTCGAACTCAAGTCAGAAGAACTTAACAAAAGCATGCTATCTATCAAATCCAACGTTGATAATTTGGCCATCAAATCGTTGGTAGATGAACTGTTATGTTGA 1254 0.4338 MASNCANRSNPYHQCTQACSQSTNQTKITTHTSKNKINSGYGRSVTDGQLGKKVDKQKRIYSACPKASNPYHECDDNCYKRLSDSGAPPPLKLDRKSKLGSKPEPPVLDTVPASKVGAIYLSEKKKVLREKNEHVPSEPISGQKQDPVVKPSYLKDQPRDHVANSMTTTHDEKKTSRKVVPVTHHVDHTEELGLNISAGGSVGSTFSGIPRGNEANLNDEAETESVSSEPRLQVGRYKVKESFVSILQSIFDRYGDIGASCHLESVVMRSYYVECVCFVVQELHSSSLIQLSSSKVKELLAILKDVESAELDIAWLRSALDELAENIELVNKQQVVEAEKDYSGHEVETIKEELRQELETLAQKEQEVADIKARIPEIRGRLRELELKSEELNKSMLSIKSNVDNLAIKSLVDELLC* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1863 417 Coils Coil 344 402 - -
Vra5g1863 417 Coils Coil 306 333 - -
Vra5g1863 417 MobiDBLite consensus disorder prediction 82 110 - -
Vra5g1863 417 MobiDBLite consensus disorder prediction 33 53 - -
Vra5g1863 417 MobiDBLite consensus disorder prediction 130 155 - -
Vra5g1863 417 PANTHER OS06G0711100 PROTEIN 3 416 - -
Vra5g1863 417 PANTHER BNAA07G03350D PROTEIN 3 416 - -
Vra5g1863 417 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 215 413 IPR007942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1863 Vra-Chr5 24448663 24450596 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1863 - - pvu:PHAVU_009G118800g 632.869