Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1859 ATGGGTGCTCTGGATCACATCTCCGAGCTCTTCGACTGCTCCAGCGGCGGTTCGAAACTGAAGAAGCGCAAGCAGTTGCAGACGGTGGAGGTGAAAGTGAAGATGGACTGCGAAGGGTGCGAGAGGAAAGTGAAGAAAGCAGTGGAGGGGATGAAAGGCGTGAACCAGGTGGACGTGGATCGGAAGGCCAACAAAGTGACGGTGGTGGGCTACGTGGAGGCCTCTAAGGTGGTGGCCCGCATCGCTCACCGCACAGGTAAGAAAGCAGAGCTCTGGCCATACGTCCCCTACGACGTCGTTGAGCACCCCTACGCACCCGGGGTGTACGATAAGAAAGCCCCCTCCGGCTACGTGCGAAACACCGATGCCTCTCACTATTCCCATCTGGCACGTGCCAGCTCCACCGAGGTCCGCTACACCACCGCCTTCAGCGACGAGAACCCCTCCGCTTGTGTCGTTATGTGA 465 0.5892 MGALDHISELFDCSSGGSKLKKRKQLQTVEVKVKMDCEGCERKVKKAVEGMKGVNQVDVDRKANKVTVVGYVEASKVVARIAHRTGKKAELWPYVPYDVVEHPYAPGVYDKKAPSGYVRNTDASHYSHLARASSTEVRYTTAFSDENPSACVVM* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1859 154 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 2 154 IPR045181 GO:0046872
Vra5g1859 154 Pfam Heavy-metal-associated domain 31 87 IPR006121 GO:0046872
Vra5g1859 154 CDD HMA 30 90 IPR006121 GO:0046872
Vra5g1859 154 SUPERFAMILY HMA, heavy metal-associated domain 26 93 IPR036163 GO:0046872
Vra5g1859 154 ProSiteProfiles Heavy-metal-associated domain profile. 35 91 IPR006121 GO:0046872
Vra5g1859 154 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 2 154 - -
Vra5g1859 154 Gene3D - 15 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1859 Vra-Chr5 24417087 24417991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1859 - K10752 gmx:100780624 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1859 5 24417087 24417991 Vra5g1859 5 24417087 24417991 ECH