Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1851 ATGGCGATGGCTTTCAAGATGGCAACCACCGGAATGTGGGTGACGGATGAATGCAAGAAATCGTTCATGGATATGAAGTGGAAGAAGGAGCACAGATACATAGTGTTCAAGATCGACGAAGGATCGAGACTCGTCACCGTTGATAAACTGGGTGGCCCCACCGACGGCTACCACGATCTCACTGCTTCCTTGCCCACCGATGATTGCCGATATGCGGTGTTCGACTTCGACTTCGTGACCGTCGACAACTGCCGCAAGAGCAAGATCTTCTTCATTGCATGGTCTCCGACAGCATCGAGGATTAGAGCAAAGATTCTCTACGCAACTTCGAAGGATGGGCTGAGAAGAGCACTGGATGGAATCAGCTATGAACTCCAAGCCACGGATCCAACGGAGATGGGTTTCGATGTAATCAGAGACATAGCGAAATAA 432 0.5 MAMAFKMATTGMWVTDECKKSFMDMKWKKEHRYIVFKIDEGSRLVTVDKLGGPTDGYHDLTASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKILYATSKDGLRRALDGISYELQATDPTEMGFDVIRDIAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1851 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Vra5g1851 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Vra5g1851 143 Gene3D Severin 2 143 IPR029006 -
Vra5g1851 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Vra5g1851 143 SUPERFAMILY Actin depolymerizing proteins 6 140 - -
Vra5g1851 143 SMART adf_2 16 143 IPR002108 GO:0003779
Vra5g1851 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 139 IPR002108 GO:0003779
Vra5g1851 143 CDD ADF_cofilin_like 10 140 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1851 Vra-Chr5 24364560 24365716 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1851 K05765 - gmx:100793035 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1851 5 24364560 24365716 Vra5g1851 5 24364560 24365716 ECH