Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1845 ATGGCATTGGAGAAAGAGGTTGAAACTGTAATAGTTGGGAACTATGAGGAGATGGAAAGTGAAGGGAAGCCTAGGGATGTAAAATCCAAGTTATTAAGCTTCTTGTGGCATGGTGGTTCTGTTTACGATGCTTGGTTTAGCTGTGCTTCCAACCAGGTGGCTCAAGTTCTGCTTACGCTGCCTTACTCATTTTCCCAGCTGGGAATGCTTTCTGGCACCCTTTTTCAACTCTTCTACGGTTTGCTGGGTTGCTGGACTGCTTACCTTATTAGCGCACTCTACGTTGAATACAGAACCAGAAAAGAGAGAGAAAAATATAATTTCAGGAACCATGTCATCCAGTGGTTTGAGGTTCTTGACGGGCTCCTCGGGAAGCACTGGAGAAACGTTGGCTTGGCCTTCAACTGCACATTTCTTCTTTTTGGATCTGTTATCCAACTCATAGCTTGCGCAAGCAACATATATTACATAAACGATAATCTGGATAAGAGAACTTGGACTTATATCTTTGGAGCGTGCTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATCTGGTCCTTTCTTGGCCTCCTCATGACCACCTACACTGCTTGGTACCTCACTGTTGCTTCTCTCCTCCATGGCCAGGTGGAAGGGGTTCAGCATTCGGGTCCGACTAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCCGTCACTGTGGAGATAATGCATGCGATGTGGAAGCCTCAAAAATTCAAGTCCATATACTTACTGGCTAGTGTGTATGTACTGACACTGACGCTTCCATCGGCAGCAGCAGTATACTGGGCATTTGGAGATATGCTTCTTGATCACTCCAATGCTTTTTCTCTCCTTCCAAGGTCATCCTTCCGTGACATGGCTGTCATTTTAATGCTCATCCACCAGTTCATAACATTTGGGTTTGCATGCACGCCACTGTATCTGGTGTGGGAGAAAGCAATAGGGATACACGAGTCTAAGAGCCTCTGCAAGCGTGCTCTTGCAAGACTACCAGTGGTGATCCCCATATGGTTTCTTGCCATTGTCTTCCCCTTCTTCGGGCCCATCAACTCCACCGTTGGATCTCTTCTTGTCAGCTTCACCGTTTACATCATTCCTGCCCTCGCTCACATCTTCACCTTCAAATCACCCTCTGCTCGACAGAATGCGGTGGAGCAACCTCCGAAGTTGGTGGGAAGATGGGCGGGTGCGTACACGATCAACGTATTTGTGGTGGTGTGGATTGTGGTGGTAGGGTTTGGATTCGGTGGATGGGCAAGTATGGTTAACTTCGTACACCAGATTGACACATTCGGTTTCTTCACGAAATGTTACCAGTGCCCCTCACCCACCTCCGTCCATCCGCCGCAACTCAACGCAACCGCGCCTTCCCCTCTCCGTCACTGA 1446 0.4793 MALEKEVETVIVGNYEEMESEGKPRDVKSKLLSFLWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLLGCWTAYLISALYVEYRTRKEREKYNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVQHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLASVYVLTLTLPSAAAVYWAFGDMLLDHSNAFSLLPRSSFRDMAVILMLIHQFITFGFACTPLYLVWEKAIGIHESKSLCKRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSPSARQNAVEQPPKLVGRWAGAYTINVFVVVWIVVVGFGFGGWASMVNFVHQIDTFGFFTKCYQCPSPTSVHPPQLNATAPSPLRH* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1845 481 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 466 - -
Vra5g1845 481 PANTHER OS05G0424000 PROTEIN-RELATED 3 466 - -
Vra5g1845 481 Pfam Transmembrane amino acid transporter protein 37 428 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1845 Vra-Chr5 24325266 24328481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1845 4 460 Organic Solute Cotransporters AT2G21050 86.871 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1845 K13946 - gmx:100806531 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1845 5 24325266 24328481 Vra5g1845 5 24325266 24328481 ECH