Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1839 ATGGGTTCTCAAGTGTCTAAACAGATGGAACGGAGAAAGACAATTCACACAGAGAAGAAAGTTCTCTCCGATCTGAAAACGTCCGGAGAAGAGTACCCTGGCTCTGAGTACCGTCCTCAAGACAGGAAAAACTGGATGTCTGGTCTGAACCCAGAGAAACTACGCATCAACCAGATCGTCTGGCCTGGGACGCACGATTCTGCCACCAACAAAATCGGCATCCCCCTCGTCACTCGTCCTTTCGCCCAGTGCCAATCGCTCTCCATATACCGGCAGTTGGTCCTTGGTACCCGCGTCCTTGACATTCGGGTCCAAGAAAACCGTAAAATCTGCCATGGCATCCTGGTCACCTACAGCGTGGACGTGGTCCTGAACGACGTGAAGAAGTTCCTGTCTGAGACACAGTCGGAGGTGATCATCCTGGAGATCAGAACAGAGTACGGGCACGAGGACCCACCCGAATTCGATAAGTACTTGGAGGAGCAGTTGGGGGAGTTTCTGATCCCTCAGGACGAGGGCGTTTTCGGGAAGAGCATAGCGGAGCTGTTGCCGAAGAGAGTTATTTGCGTGTGGAAGCCCAGAAAATCGGCCCAGCCCAAAGCAGGGAGTCCTCTGTGGAGTGCGGGCTTTCTGAAGGATAATTGGGTGAACACGGATCTTCCTTCCACGAAGTTCGACGCTAATTTAAAGCACTTGAGCGAGCACCCACCCGTGACGTCGCGCAAGTACTTCTACAGGGTGGAGAACACCGTTACGCCAGTGGCCGATAACCCTGTTCTGTGCGTGAAACCCGTTACACGACGGATTCATGGATACGCCAGGCTCTTCATCGCTCAGTGCTTCGCTAAAGGCATCGCTGATAAGCTTCAGGTTCTCTCCACCGATTTCATCGAGGAGGATTTTGTTGATGCCTGCGCCGGACTCACTCATGCAAGGGTCGAAGGCAAAGCCTGA 954 0.5325 MGSQVSKQMERRKTIHTEKKVLSDLKTSGEEYPGSEYRPQDRKNWMSGLNPEKLRINQIVWPGTHDSATNKIGIPLVTRPFAQCQSLSIYRQLVLGTRVLDIRVQENRKICHGILVTYSVDVVLNDVKKFLSETQSEVIILEIRTEYGHEDPPEFDKYLEEQLGEFLIPQDEGVFGKSIAELLPKRVICVWKPRKSAQPKAGSPLWSAGFLKDNWVNTDLPSTKFDANLKHLSEHPPVTSRKYFYRVENTVTPVADNPVLCVKPVTRRIHGYARLFIAQCFAKGIADKLQVLSTDFIEEDFVDACAGLTHARVEGKA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1839 317 SUPERFAMILY PLC-like phosphodiesterases 41 308 IPR017946 GO:0006629|GO:0008081
Vra5g1839 317 SMART plcx_3 50 191 IPR000909 -
Vra5g1839 317 Gene3D Phosphatidylinositol (PI) phosphodiesterase 41 308 IPR017946 GO:0006629|GO:0008081
Vra5g1839 317 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 7 314 - -
Vra5g1839 317 Pfam Phosphatidylinositol-specific phospholipase C, X domain 73 172 IPR000909 -
Vra5g1839 317 PANTHER UNCHARACTERIZED 7 314 - -
Vra5g1839 317 MobiDBLite consensus disorder prediction 1 44 - -
Vra5g1839 317 CDD PI-PLCXDc_plant 32 312 - -
Vra5g1839 317 MobiDBLite consensus disorder prediction 9 26 - -
Vra5g1839 317 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 56 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1839 Vra-Chr5 24290493 24291847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1839 1 317 Acyl Lipid Metabolism Gene Families AT4G38690 74.214 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1839 - - gmx:100805096 591.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1839 5 24290493 24291847 Vra5g1839 5 24290493 24291847 ECH