Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1836 ATGGGGATTGCAGAGAACTCAAAGGGTTTGGTTCTGGCCGTCGCGTCGGGTGTGTTCATAGGGGCAAGCTTCATTTTGAAAAAGAAAGGTCTTAAACAAGCTGCTACTAACGGCACTCGTGCAGGAGTTGGAGGCTATTCTTATCTACTACAGCCTTTCTGGTGGGCTGGCATGGTTACAATGTTTATTGGGGAGGTTGCTAATTTTGTGGCTTATATATATGCTCCTGCACTTCTCGTTACTCCCCTCGGCGCACTGAGTATAATTGTCAGTGCTGTTTTAGCCCACTTCTTGTTGAAGGAAAAGCTTCAGCAGATGGGGATTTTGGGTTGTGTGTTCTGCATCGTGGGTTCAGTTCTCATTGTCATCCATGCACCTCAAGAGCACGCTTTGAATTCTGTACAAGAAATATGGGATCTCGCCACTCAGCCTTTATTTCTTGTTTATGTGACGGTAACAGTGTCGATAATTTTAGCCTTGATTTTGCATTTTGAACCTCGCTATGGTCAGAAAAATATGCTGGTCTACTTGGGAATTTGTTCATTGATGGGCTCACTTACGGTTATGAGCACAAAAGCCATAGGAATTGCAATCAAGCTTACATTAGAAGGAATAAGTCAATTAACGTATCCTCAAACTTGGTTTTTTCTTACCGTGGCTGTCATATGTATCATTACACAGCTGAACTACCTGAACAAGGCACTGGATACGTTCAACACAGCCATTGTCTCTCCCGTACATTATGTCATGTTCACAACTCTGACTATTATTGCTAGTGTGATAATGTTTAAGGATTGGTCTGATCAGAGTGCAAGCAGCATAGCCTCTGAAATATGTGGATTTATCATTGTCCTTTCAGGAACAATCTTATTGCATGCGACAAGAGAAAAAGAACAACCTAACATGCGAGGGTCCTTAACATGGTACATTGGTGAAGACTTGGTGAAGGGCATTGAAGATGAACGCCTGAACCTTATTATACACGGGTCAGATTACATTGAACAGTGA 1008 0.4246 MGIAENSKGLVLAVASGVFIGASFILKKKGLKQAATNGTRAGVGGYSYLLQPFWWAGMVTMFIGEVANFVAYIYAPALLVTPLGALSIIVSAVLAHFLLKEKLQQMGILGCVFCIVGSVLIVIHAPQEHALNSVQEIWDLATQPLFLVYVTVTVSIILALILHFEPRYGQKNMLVYLGICSLMGSLTVMSTKAIGIAIKLTLEGISQLTYPQTWFFLTVAVICIITQLNYLNKALDTFNTAIVSPVHYVMFTTLTIIASVIMFKDWSDQSASSIASEICGFIIVLSGTILLHATREKEQPNMRGSLTWYIGEDLVKGIEDERLNLIIHGSDYIEQ* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1836 335 PANTHER UNCHARACTERIZED 3 332 IPR008521 GO:0015095|GO:0015693|GO:0016021
Vra5g1836 335 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 124 - -
Vra5g1836 335 Pfam Magnesium transporter NIPA 6 296 IPR008521 GO:0015095|GO:0015693|GO:0016021
Vra5g1836 335 PANTHER MAGNESIUM TRANSPORTER NIPA6-RELATED 3 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1836 Vra-Chr5 24277930 24281279 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1836 K22733 - gmx:100808127 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1836 5 24277930 24281279 Vra5g1836 5 24277930 24281279 ECH