Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1832 ATGTCTTCCATTCCGAAAGGAGGGTCTCACAAAGGAAGTTTAAAGAGTTCAGAGGCACATGCTAGTGTAGCAGAAAAGGAGGAATATCATTTCTCAAAAGCAATAGATAGGCCCAGGCCGGCTTTGAATATAGACAGACAGAGATCATGTGATGAAAGATCACTGAGTGAACTATCCGTAGGCTTTTCTCCACGTCATTTGATCTCAAAAATTGAGTTCACATCTCGCCTGGCAGAACATGTTGATCATATACATTCCCCTCTGTCAAAGTCTGGCATCAATACTCCAAGATCAGTGCCATGGGATTCACATTCATTAACATCAGAAGCTTGGGAAGCTCTGAGGCGTTCCTTGGTATATTTTCGTGGCCAGCCAGTTGGTACAATTGCTGCTTTGGATAATTCGGATGAGCAACTTAATTATGATCAGGTGTTTGTAAGAGACTTTGTCCCTAGTGCTTTGGCTTTTCTAATGCATGGTGAACCGGACATTGTTAAAAATTTTATTTTAAAGACCCTTCGCCTTCAATCGTGGGAGAAAAAGATTGACAGATTCCATCTAGCAGAAGGGGTGATGCCTGCTAGTTTTAAAGTATTCCATGATCCCGTCAGAAACCACGAAACCCTTATAGCAGATTTTGGTGAAAGTGCGATAGGAAGGGTCGCTCCAGTTGATTCTGGATTTTGGTGGATCATACTACTTCGGGCATACACAAAGTCTACGGGAGACTCTTCACTGGCCGAAGAACCTGAATGTCAAAAGGGTATGCGCTTGATCCTGAGTCTATGTCTGTCAGAGGGGTTTGACACGTTTCCAACTTTACTATGTGCTGATGGATGCTGCATGATTGATCGCAGAATGGGTGTTTATGGGTATCCAATAGAAATTCAAGCATTGTTCTTCATGGCTCTAAGATGTGCCTTGCAATTACTTAAGCCAGATGCCGAAGGGAAAGAGTTCATGGAGCGAATTGTAAAAAGGCTGCACGCCTTAAGCTATCATATGAGGAGCCACTTCTGGTTGGATTTGAAGCAACTCAATGATGTATACCGCTACAAAACAGAGGAGTACTCACATACTGCAGTGAACAAGTTCAATGTTATTCCAGAATCTTTGCCAGATTGGGTGTTCGATTTCATGCCGCACCTTGGTGGATACTTTGTTGGGAATGTGAGCCCAGCTAGGATGGATTTCCGGTGGTTTTGCCTCGGCAACTGCGTTGCAATTTTGTCGTGCATGGCAACTCCGGAGCAGTCAACTGCAATCATGGATCTCATAGAATCACGGTGGGAGGAATTGATTGGGGAGATGCCTGTGAAAGTATGTTATCCAGCTCTAGACAACCATGAATGGATGATCATAACAGGGTGTGACCCAAAAAATACTAGATGGAGTTACCATAACGGGGGATCCTGGCCAGTTCTGTTATGGCTTCTGGCTGCTGCGTCGATAAAGACAGGGAGACCCCAGATTGCAAGACGTGCCCTTCAAATAGCTGAGAATAAATTGCTGAAGGACAACTGGCCGGAATATTACGATGGAAAGTGGGGGAGATACGTTGGGAAGCAGGCCCGTAAGTTCCAGACCTGGTCCATTGCCGGCTACTTGTCCGCTAGGATGATGCTGGATGACCCTTCCCATATAGGCCTTGTGGCTCTCGAAGAAGACAAACTACTCAAGCCTTTGCTCAAGAGATCAAACTCATGGACTTTGTGA 1716 0.4499 MSSIPKGGSHKGSLKSSEAHASVAEKEEYHFSKAIDRPRPALNIDRQRSCDERSLSELSVGFSPRHLISKIEFTSRLAEHVDHIHSPLSKSGINTPRSVPWDSHSLTSEAWEALRRSLVYFRGQPVGTIAALDNSDEQLNYDQVFVRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFHLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAEEPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALQLLKPDAEGKEFMERIVKRLHALSYHMRSHFWLDLKQLNDVYRYKTEEYSHTAVNKFNVIPESLPDWVFDFMPHLGGYFVGNVSPARMDFRWFCLGNCVAILSCMATPEQSTAIMDLIESRWEELIGEMPVKVCYPALDNHEWMIITGCDPKNTRWSYHNGGSWPVLLWLLAAASIKTGRPQIARRALQIAENKLLKDNWPEYYDGKWGRYVGKQARKFQTWSIAGYLSARMMLDDPSHIGLVALEEDKLLKPLLKRSNSWTL* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1832 571 MobiDBLite consensus disorder prediction 1 30 - -
Vra5g1832 571 Gene3D - 132 540 IPR012341 GO:0005975
Vra5g1832 571 PANTHER ALKALINE/NEUTRAL INVERTASE B-RELATED 1 570 - -
Vra5g1832 571 PANTHER - 1 570 IPR024746 GO:0033926
Vra5g1832 571 SUPERFAMILY Six-hairpin glycosidases 70 538 IPR008928 GO:0005975
Vra5g1832 571 Pfam Alkaline and neutral invertase 110 545 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1832 Vra-Chr5 24257879 24261472 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1832 - - gmx:100796722 1030.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1832 5 24257879 24261472 Vra5g1832 5 24257879 24261472 ECH