Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1831 ATGAGGGGTGGGAAGAAAACGATCCACGCAATCATCACATGGATGCGGCGGCAACCACCAAAGGCGAAGGCTTTAATCGCCGTCTTGTTAGGCATGACGGCTCTCGTCCTTCTTCGCATCATTGTTCACGACCACGACAATCTTTTCGTCGCCGCCGAGGCTGTTCATTCTCTTGGAATCTCTGTTCTCATCTACAAGCTCATCAAAGAAAAAACTTGTGCCGGATTATCACTCAAATCCCAGGAATTGACAGCTCTGTTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTCATGGAATATGATATACACACCCTTCTTGATTTGGCTACTTTTGCTACAACAGTGTGGGTTATATACATGATTCGTTTTAAATTGAGATCTAGTTACATGAACGATAAAGACAATTTTGCTATATACCATGTGGCGATACCCTGTGCTGTGTTAGCCTTGTTTATTCATCCATCAACTTCACATCATTTATTGAACAGGATTTTCTGGGCATTCTGTGTATATCTTGAAGCTGTGTCAGTACTGCCCCAACTGCGAGTCATGCAGAACACCAAAATTGTTGAGCCATTCACGGCACACTATGTATTTGCCCTGGGCGTGGCGAGATTCTTGAGTTGTGCTCATTGGGTTCTTCAGGTGTTGGATAGTCGTGGACATTTGTTGGTTGCCTTGGGGTATGGATTATGGCCGTCAATGGTGCTTATTTCAGAAATTGTGCAGACATTTATCTTAGCAGATTTCTGTTACTATTATGTTCAAAGTGTTTTCGGGGGACAGCTTGTTCTCCGCCTACCTTCTGGAGTGGTGTGA 819 0.4396 MRGGKKTIHAIITWMRRQPPKAKALIAVLLGMTALVLLRIIVHDHDNLFVAAEAVHSLGISVLIYKLIKEKTCAGLSLKSQELTALFLAVRLYCSFVMEYDIHTLLDLATFATTVWVIYMIRFKLRSSYMNDKDNFAIYHVAIPCAVLALFIHPSTSHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVQSVFGGQLVLRLPSGVV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1831 272 PRINTS ER lumen protein retaining receptor signature 48 67 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PRINTS ER lumen protein retaining receptor signature 75 95 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PRINTS ER lumen protein retaining receptor signature 166 186 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PRINTS ER lumen protein retaining receptor signature 188 202 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PRINTS ER lumen protein retaining receptor signature 202 220 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 1 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 Pfam ER lumen protein retaining receptor 72 214 IPR000133 GO:0006621|GO:0016021|GO:0046923
Vra5g1831 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1831 Vra-Chr5 24254261 24256597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1831 1 272 Miscellaneous Gene Families AT4G38790 83.150 1.03e-171 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1831 - - gmx:100797621 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1831 5 24254261 24256597 Vra5g1831 5 24254261 24256597 ECH