Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1812 ATGTTTATTGACGGATATCACAGGTCTTCATCATTTGAGCAGACATATCGATGTTACTCTGTTTCATTTATTGAAAAGCCCGAAATCGAAAATGGCGATAAAATTATAATGCCTGCTTCAGCCCTTGATCATCTAGCATTTTTACGCATCGATTATCCTATGATGTTTGAACTCACTAATGGTGCTTCTGAGCGGGTTTCTCATTGTGGAGTTCTGGAGTTCACTGCAGATGAAGGAACTATATATATGCCATACTGGATGATGCAGAATATGCTTTTGCAAGAGGGAGACACCATAAGAGTTAAATATGCATCACTGCCAAAGGGTACATACGTTAAATTACAACCCCACACAAAGGACTTCTTTGATATCTCCAATCCAAAAGCTATCTTAGAGACTACTTTGAGAAAATTTTCATGCTTAACGACTGGAGATACTATCATGGTGACATACAACAACAAAAGGTATTACTTAGATATCATTGAAACAAAGCCTGCTAAAGCTATAAGCATCATCGAGACAGACTGTGAGGTGGACTTTGCTCCTTCCTTGGATTACAAAGATCTTGGAAAGCCTAACATTGCAGACAAAACACAAAACAAAGGTAAGTTCAATCCATTTTTTGGGACTGCGAGACGCTTGGATGGAAAACCTATTCCTGCTGTTTATTCATCACGGCATAGAAACAAACATGTTCCAAACGTGAATGCACTGTCTTCCACAACATCTCCATCTGGGGGAAAGCTAGTATTTGGATCAAACTTTTACCGTACAAAAGAAACAGGAAAGGAAGAGATGGAGCCAAAACTAGAATCAAGCCAGCAAAAGCAACCAAAATTTCAGCCTTTCATAGGGAAGAAGTATTCCCTGAGGGGTTGA 879 0.3925 MFIDGYHRSSSFEQTYRCYSVSFIEKPEIENGDKIIMPASALDHLAFLRIDYPMMFELTNGASERVSHCGVLEFTADEGTIYMPYWMMQNMLLQEGDTIRVKYASLPKGTYVKLQPHTKDFFDISNPKAILETTLRKFSCLTTGDTIMVTYNNKRYYLDIIETKPAKAISIIETDCEVDFAPSLDYKDLGKPNIADKTQNKGKFNPFFGTARRLDGKPIPAVYSSRHRNKHVPNVNALSSTTSPSGGKLVFGSNFYRTKETGKEEMEPKLESSQQKQPKFQPFIGKKYSLRG* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1812 292 PANTHER UBIQUITIN FUSION DEGRADATON PROTEIN 1 1 292 IPR004854 GO:0006511
Vra5g1812 292 MobiDBLite consensus disorder prediction 261 292 - -
Vra5g1812 292 Gene3D - 4 106 IPR042299 -
Vra5g1812 292 Pfam Ubiquitin fusion degradation protein UFD1 12 182 IPR004854 GO:0006511
Vra5g1812 292 Gene3D - 108 181 - -
Vra5g1812 292 PANTHER UBIQUITIN FUSION DEGRADATION PROTEIN 1 HOMOLOG 1 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1812 Vra-Chr5 24109138 24112466 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1812 K14016 - gmx:100795133 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1812 5 24109138 24112466 Vra5g1812 5 24109138 24112466 ECH