Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1806 ATGGCCTCTGCTTCCGCCACTCTTCTCAAGTCATCTCCGGTTATCGACAAGTGCGAATGGGTCAAAGCTCAGACCCTCCGCCACACTCCGCCGCTATCTGTCGTCAGATGCAACCCCGCTCTCACCATCAGAGCTTCCTATGCCGACGAGCTCGTCAAAACCGCGAAAACAGTTGCATCGCCGGGGCGTGGTATTTTGGCGATGGACGAGTCAAATGCAACCTGCGGGAAGCGTCTGGCATCGATTGGGTTGGAGAACACTGAGGCTAACCGCCAGGCATATCGTACACTACTTGTTACAGCACCCGGTCTTGGTCAATACATCTCTGGCGCCATTCTCTTCGAAGAAACTCTCTACCAATCCACCGTTGACGGAGAGAAGATCGTAGACATCCTTCTTCAACAGAACATCGTTCCCGGTATCAAGGTCGATAAGGGTTTGGTTCCTCTGGCTGGTTCCAACGATGAGTCCTGGTGCCAAGGTCTGGATGGTCTTGCGTCTCGCTCAGCTGCTTACTACACTCAAGGTGCCCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAACGGTCCCTCTGCTTTGGCAGTCAAGGAAGCTGCCTGGGGTCTGGCTCGCTATGCTGCCATTTCACAGGAGAACGGATTGGTCCCCATTGTAGAGCCAGAGATCTTGCTTGATGGTGAGCATGGCATTGACAGGACATTCGAAGTAGCGCAAAAGGTGTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCTATTTGAGGGTATTCTCCTTAAACCCAGCATGGTTACTCCAGGAGCTGAGTCTAAGGATAGGGCCACTCCTCAGCAAGTTTCTGACTACACCCTCAAGCTCCTTCACAGGAGAATCCCACCTGCTGTCCCTGGAATCATGTTTTTGTCTGGTGGACAGTCTGAGGTTGAAGCAACGTTGAACTTGAACGCGATGAACCAGTCTCCAAACCCATGGCACGTGTCGTTCTCCTATGCCAGAGCCCTCCAAAACACCACCTTGAAGACATGGGGAGGGCGGGCAGAGAACGTTAAAGCAGCACAAGACGCACTTCTTTTCCGTGCCAAGTCCAACTCTCTCGCTCAACTTGGAAAGTACACAGGAGAAGGTGAATCTGATGAAGCCACAAAGGGGATGTTCGTCAAAGGCTACGTCTACTAA 1185 0.5232 MASASATLLKSSPVIDKCEWVKAQTLRHTPPLSVVRCNPALTIRASYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGEKIVDILLQQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYTQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQENGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVLFEGILLKPSMVTPGAESKDRATPQQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTTLKTWGGRAENVKAAQDALLFRAKSNSLAQLGKYTGEGESDEATKGMFVKGYVY* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1806 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 35 394 - -
Vra5g1806 394 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 255 265 IPR029768 -
Vra5g1806 394 Pfam Fructose-bisphosphate aldolase class-I 50 394 IPR000741 GO:0004332|GO:0006096
Vra5g1806 394 Gene3D Aldolase class I 33 393 IPR013785 -
Vra5g1806 394 SUPERFAMILY Aldolase 42 394 - -
Vra5g1806 394 CDD FBP_aldolase_I_a 48 374 - -
Vra5g1806 394 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 35 394 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1806 Vra-Chr5 24081744 24083709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1806 45 394 Miscellaneous Gene Families AT3G52930 55.650 4.19e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra5g1806 K01623 - gmx:100798677 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1806 5 24081744 24083709 Vra5g1806 5 24081744 24083709 ECH